48cc0aa29826d6f6e99357a12eda728d76a7d132 markd Fri May 17 02:31:33 2024 -0700 fixed error in pslSpliceJunctions TSV header diff --git src/utils/pslSpliceJunctions/tests/expected/rnahg38Test.tsv src/utils/pslSpliceJunctions/tests/expected/rnahg38Test.tsv index 457ae7b..4af7e72 100644 --- src/utils/pslSpliceJunctions/tests/expected/rnahg38Test.tsv +++ src/utils/pslSpliceJunctions/tests/expected/rnahg38Test.tsv @@ -1,16 +1,16 @@ -qName qStart qEnd qSize tName tStart End Size strand iBlk tGapIdx tGapSize junc5p junc3p isCannon +qName qStart qEnd qSize tName tStart tEnd tSize strand iBlk tGapIdx tGapSize junc5p junc3p isCannon mm_NM_011041.3 249 259 4334 chr14 36661696 36661963 107043718 + 0 0 267 tg tc 0 mm_NM_011041.3 270 271 4334 chr14 36661952 36661977 107043718 + 1 1 25 tc ct 0 mm_NM_011041.3 281 334 4334 chr14 36661967 36662093 107043718 + 2 2 126 gg gg 0 mm_NM_011041.3 394 394 4334 chr14 36662033 36663374 107043718 + 3 3 1341 GT AG 1 mm_NM_011041.3 872 889 4334 chr14 36662896 36663401 107043718 + 4 4 505 gt gg 0 mm_NM_011041.3 896 903 4334 chr14 36663394 36663524 107043718 + 5 5 130 cg cc 0 mm_NM_011041.3 1022 1022 4334 chr14 36663405 36666601 107043718 + 6 6 3196 ta tc 0 mm_NM_011041.3 1164 1164 4334 chr14 36666459 36676457 107043718 + 7 7 9998 GT AG 1 mm_NM_011041.3 1424 1481 4334 chr14 36676197 36676616 107043718 + 8 8 419 aa tc 0 mm_NM_011041.3 1573 1616 4334 chr14 36676524 36676889 107043718 + 9 9 365 ct tg 0 mm_NM_011041.3 1852 1870 4334 chr14 36676653 36676970 107043718 + 10 10 317 tt cc 0 mm_NM_011041.3 1939 1939 4334 chr14 36676901 36676988 107043718 + 11 11 87 tt ga 0 mm_NM_011041.3 1953 1984 4334 chr14 36676974 36677020 107043718 + 12 12 46 aa at 0 mm_NM_011041.3 2067 2067 4334 chr14 36677020 36677114 107043718 + 14 13 94 tc tt 0 mm_NM_011041.3 2084 2084 4334 chr14 36677097 36677127 107043718 + 15 14 30 cg tc 0