b31907d700c1fe956e4e4c20e64d91de027d7c84 markd Tue May 14 02:03:33 2024 -0700 merge blatHuge implementation diff --git src/blat/hCrea.geno src/blat/hCrea.geno deleted file mode 100644 index edc0255..0000000 --- src/blat/hCrea.geno +++ /dev/null @@ -1,100 +0,0 @@ ->hCreaGeno -CATGCCACATCCCCGGGGCGGGAGGGGGCTACATCCCCGGCTTTAGACGCGCGAGTCTCAGGTCCCGCTA -ATTACCTGGCGGGTGCTGCCCACCCCTGCCCTCGCGCACCTAGCGCGTGGCAGCGGGAAGGCGGGGCCTG -GGGGAGCCCCACCCCTGGAGACTGCGGCTGGGGCCTCCCTCTCCTCCGCCCGCCCGCCTGCCACTAGCTC -ATTGCGCCTCTCCTGCAGTCTGATTGGGCACCGGCTCCCATTCCGGCTCCAGCCTCCAATCCGACCCCCA -TTTCGGCTGCAGCCTCGGACCTAGCTCCGGCCCTCGGTCTATCCGGTTGCATCCTCCCTCCCTGTTCCGG -ATCTTATCTTGCGCCAGCGCCTACTCCAGGATCCCGTAGCCAGACCTCAAGCCATGGCTGGTCCCTTCTC -CCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGG -TTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGAGGCTGTATCCCCCGAGGTAACAGT -GCCTGAGGCGCGGGAGGAGGCGGGGGCAGGAGGTGATGGGAACGAAGGTGCGGGTAGAAGTGAGAATCCG -GGCAACAGAGAAGGGCTATAATCACGAAGGCCCTGGAGCTGGAGGGCTGTGCAGTCTGCAGACCTCAGTG -GGGTGGGGGTGGGGGCCAAAACCATAAAGCAAGAACATTCCTGGGGACCTGCCAAGACCAGCTCTGGCCC -TACGAGTTCTAGCTGCACTGGCTGCCCAAATCCCTAATTGTAAAGCCAGGAACTATCCTTTTCGCTCCCC -TCCATCTCCTTCCCTCATTTCCTCAATTCCTCTCCTTAGGCTTTTCCCCTCCTCCATCCGTAGTGTTGTG -TCATGGGAGGAAAGAACTGAGCAGATCTGAAGAAACTGAGCTGGCCAGCCAGAGGCAACTAGAACTATTA -GGAAAGCATAGACTCTGAAAGTCCCTAAAGAGATTACCAAGGTTTACCCTCTTTCTAATTCCCCTCCTCC -CGCGGAGCAAAGCCAGACATGGCCAACTGGACAGCTCCCAGGTAACTGCACTAGGTCTAGGCGTCTGTGA -CCCTCCCTCCATGGTTACTGGGTACCCCCTCCCCAGCGCTGAGTACCCAGACCTCCGAAAGCACAACAAC -TGCATGGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCTGCGACAAGACCACACCCACTGGTTGGA -CGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCCTTCATCAAGACTGTGGGCATGGT -GGCTGGAGATGAGGAGACCTATGAGGTAGGGGGTCCCCAGAGTCTCCCTGATGATCCAATTCATCTTCCC -AGTAATCCCAGCTCCTTTCCCTTAAAGACCTCTCACTTTCCCCCAAGACTCTGAGCCCCCCATACTTAAG -TTTTCTGAACCAGTGAAATCAATGCACAATTGAAGTCTGGGGAGGGATTCCCTCTCCTTAACCATCTCTC -CCTCTTAACTCCCCTTAGGTATTTGCTGACCTGTTTGACCCTGTGATCCAAGAGCGACACAATGGATATG -ACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAGTAAAGTGAGTTCAAATATCCCACTTCTGAT -TTGCATTGCCTGTGTACAACACTCTGTATCTCCAACCCCTTCACCTTATTTCCTGACTCATGGTCATTAT -ACTGCTGAGCTTTTAATCTTAATGTAAGGAAAGAATCATATCTTAAGGGGCAGCATATATGGAGATGGAA -GGATAGATAAGAATGACCATGACCCAAGGTGGGTGGTTTGGGGACGGGTCTGCAATGCCCCCTTCAATTC -CAGTGCTTTCCCAAAGGGCCTCTTCTTCCAATGCATGCAGGAAGAATGCACACAGAGTCCTCTAATGCCT -AAGGAAGGTCTCTCCTTTCCCAGGGGCCCTCAGTTCCCACCGTGTTTCTGTGACTTACATTCATTTCCCT -TATCTCCCAGATCCGTTCTGGCTACTTTGATGAGAGGTATGTATTGTCCTCTAGAGTCAGAACTGGCCGA -AGCATCCGAGGACTCAGTCTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAGGTGGAACGTGTTGTGG -TGGATGCACTGAGTGGCCTGAAGGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGAGATGACAGAGGC -TGAACAGCAGCAGCTTATTGATGTGAGGGCCTTAAGAGGGTGCTGGTTGGTGGGAGCAGATGGGGAAGGC -TGGGCCAGATGAGACATGGGCTCTGAAAGGCCCAGGGGCCACCATGAAGATTCTTAACCCAAGTCCCGTT -ACTCTTCCCAGGACCACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGACTGCAGCAGGAATGGCTCG -AGACTGGCCAGATGCTCGTGGAATTTGGTATGAAGCTGCTCATTACCTCTTTTGTCTTCATGCCCTCATA -AATGCTTTTTTTCCCTCTATCTCTCCCAATTCTTGCCTTGCCTCTTGATCACTGTCCCTCTCCGGCCCTC -AGGCACAACAATGAGAAGAGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTGATCTCCATGG -AGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAGATTCTGCCGAGGCCTCAAAGAGGTTAGAGAAGACTA -TGTAGGGGAGCTAGGTGGGAGGACATAAGGAAAACCAAAGAGTAGCATAAATAGATTATGTAATTTACCA -ACCAACCCAGGACATGTCTTATAGTAAAAAGGACTATCTAGGACTCACTCCAGGACTAAAGGTGTAAACC -AGCTGGGACCATACTGGGAAAACCAGGACATGTGGTCACACTAAGATTAGGAAAAGAAAGAGTGTCAGGA -ATCTTAGGAAGTGAACAAGGCTTTTGACAGAGAGTGCAAAGAAGGAATAAATGAGATGGCACGTCAGTGC -CTGGGATGTGTGCAGTGGGATGGTGAGGTGTGCAGATAAGGAAAACATTCGAGCTTAGATTGATGTTGGC -GGGGAGAGGTTGCTGTGTTCATGACTCTAATATAACCACCCAGTTCTGAGACAAGGTAGGCCTTGACTCT -GGATTCTATCATTCTTGTTAAAGTTTCGGGTCTAGGCTTTAAGTTGAGAGTTCGGAGAGAGACTGGGGAA -GGTGGAGGATAGAATGGTTCGAGTTCTAGAATATGTGGCTCTAGATGAGAGGTTGAACTGAATCATCAAT -CCTACATGGATTGGGTCTCCGTATTCAAGTCTACATTAGAAATCCCCATAAACTCAATTCAATTCTTACT -GTATGTTCTCAAACATACAGTTCTATTTTAGGTTTGCAAAGAAAAAGAGCTCCTCTTTTAGATTCTGAGA -AGTTTCTACTATTTTTGGCAAGTAATAGATAACATATTCTGACTATGAGTGGGtagggaagtacctttaa -attatatgcctcagtttcctcatctgtaaaattgggataatgagattttctacattttaggttgttgtgg -ggattaagtgaaatacaggtaaagtacttggtccacagtaagtgcttaataagtgttaaagtgttagctg -caatattattCTGGATGGAAGAGTTTCCCCCCATGTTCAGCATGTAAGATATCCCCTATGGCATGGTTCC -TTCTGAACTATAAAGAGGATCCCTTTACTCATGTTGGGTTGTGGTCTTTGTGACCATCATTCTGCTAGAT -CCCTTGTCTCTTGAACTCTAATAGTCATCTTCATGACTACATGGTTAAGTGAAGCCAAACGCCTTCCCCC -CGCCCCCTATTCCTATGAATCTGGCTTTTCTGCTCTGTTTTCATCTTTCTCTGCATTCACACAGGTGCTC -CGTTCACAGCTAACAGAATGTTATCTTACCTCTTCCTGGCAAAGCTTACACCTTCATCTTCTGTCTGAAG -GGACCCTTCTAAGCTCTAGGCTCATTAGCAAAGCAAAGATAATCGATGCATGCAGACCTCATTGAATAAT -CAGTCATCTCTCAGTTCAGTTTACCACCTCTGTTCATTTCCCTAGATCATCCTTAATACACCACTCCTTC -GAGTTTTCTTCTTCCACATAAGATATTTTTTCACAATCTCATTATTATGCACATCATAATTTTGCATCAT -GCATGCATGAAAACAATAACAAACCTTTTTCATTTAAAAAAAGACCAATGTCATTCATTCACAGCCAAGT -TTCTGTTCTAGACATATTTCTAGTGTTCTTGTGGGTCTAGCTAAGGGAGGGTCCAGGGTTAATGAAATAT -CCCTGATTTTTCGTTAACAAAACCTTTGTGGACTCAGGTGGAGAGACTTATCCAAGAACGTGGCTGGGAG -TTCATGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGCACTGGACTTCGGGCAG -GAGTGCACATCAAACTGCCCCTGCTAAGCAAAGTAAAGGAGTTGTGGGGTTACAGAGGGGTGTGAGTAAG -GAAGGGTGGGTTGTGGATGGGGAGGGAGTGGACCCTTTGGAAAGGAGCCAAACATGTTGTGGCTAAAGGG -TCAGAGGACAggccaggcacagtggctcatgcctctaatcccaacacttgggaggccaaggcaggcagat -tacttgagcccaggagttcaagaccagcctgggcaacctggtgaaaccccatctctacctacaaatacaa -aagttagctgggtgtagtggaggctgaggtgagaggatcacttaagcctgggaagtcgaggcttcagtga -gctgtgatcactccagcctgggtgacagagagagaccctgtctaaaaaaaattaaaaaagaaaaaagaaa -aaaGGAAAAAAAAAGTTCAGGAGACAGAGCTCTGAGCAGGTTCAGGGCTCTTTCAGGTAGGACCTAGTCT -CTGCCTCTATTGACCCTGCTCCCAATCCCTATCTCCTCTCTAGGATAGCCGCTTCCCAAAGATCCTGGAG -AACCTAAGACTCCAAAAACGTGGTACTGGAGGAGTGGACACTGCTGCTACAGGCGGTGTCTTTGATATTT -CTAATTTGGACCGACTAGGCAAATCAGAGGTGAGATCCTAAGGGATTAGGACAAGGAGAGGTATAGGTCT -GCGAGGGCCGAAATATGGCAGTGAGTGAGCCTCCGGGATGTAACATAATCTGAAATGAAATTCAGGTTGA -GTGGGAGGCAATTGGAAATGAGCAGGCAAGTCAGTCAGTGATAAAGAAAAACTCAGACTGTAGGAAGCAG -ATCAAAGATTAGTGTCCCTTAGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGATTGAT -TGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCATTAAC -TCCCCATCGCCAGCTGATGACTCAAGATTCCCAGGAGTTTTGCTCATTCTAATGATGGCCCATTCTACTT -GCTCTGGACCTGCCCCCGCATCCCCTGCCTCCATCCTAGTAAAGACTCCTTGCTATGCTGCAGCTGTCTG -TGTTACTTCTAATGGTGGGGTGAGGAGGGAGCAGCCTTCAGGAAATGAAAAGAGGCAGTGGGATTATTTA -TGATGGAAAGAGACTCCAGATATGGCAACCCAGGAACACTGATTCTCAGGTGGGTGGAAAGCATTAACAT -TTTACCCATATTCCTCATCAGCTTCTGAAAATAATCAGGATGCACTTCTGTTTGCACTTTATTCATTATG -ACTTAAGATTTCTCTCCCCACAATCTCCTTCTACTGTAGAGACAGGCTCATAGCAGGTGGCCAAGGAAGC -TGATAGTCAATACCAGGGACCAGGAAGGTCGTGACCAGTCCTGGAGGCCCCAGGCTGTACTTCGACCTAT -AATAGACAGGGAATGGGAGTAATATCACAACTCAGCTCTCCAGGAGCATTGATACTTGGAAATTAGCGCT -CTGCCTGTAGACTCCTTCACTCCAGGGATCTCCCTGGGTGCACTCTAAGAGCCAGACAGCACCAAATTAG -GGGTTTGATTCTGGGTCAGGAGATGGAGGATCAAGCTGTGCAGCTGGGAACTCACCTTGCTGTTCTGGGC -TCTCCTTTCCCTCATGTTGGGCCCATGCAACTGCTCGTCGCTGCTCAGGACTCAGAAAGGCCATTTGCTC -AGGAGTGACAGCCACAGCCTGAGCACTGGTGAGACTAGATAGTTGGATGGGACTAAACACCACCTGAGGG -CAGGGGTAGGAATCAGTGCATGCATGTAGTCCCCATTGGGCCCTGGCTCTCCTGTGGTCACCCCAGTCCA -TTAATACTTACAGCAAATTTAGGAGGAGGGATGACAGAAATGGCAAGAGGAGTAACGCCCTGGATCTGTC -CCCGCAGCAGTGCTGAAAGAGCCAGGTCTGGGATCCCAGCTGTTGAAGCAAGTGGCATCCAAACATTGTC -TTAGACTGACCTTCCCTCTCTTCAAACCTATAGACCTTCTCTAACTACTCCCAAAGTGCCCTATCATAGA -CCTTCCCCAATATGTCTCTAGCCCCTTATTTAAACACCCTCAGGCCCCCACCTTAAGAATTGCAGGGCAG -TCTTCCATCCAGTCCACCCATGGTATAGAAACCAAACCAACTTGCACCAGCAGTGGCCCAGCTCCCCACC -TGCTATGGTGCCAATTTCAGTGAAGATCTCAGGCCCCCAGTTACTGATTGGGCCAAACCCACCAGGCAGT -ACAAGTAGGTGGGCCAGAACCTCCAGTTGTTCCTCAGAGCACTGCAGATGCAGGGTGCCGAGGAAGAGAG -CTGCTTGGCTGTAGAACAGTGGGAAGGAAGGAAGAA