b31907d700c1fe956e4e4c20e64d91de027d7c84 markd Tue May 14 02:03:33 2024 -0700 merge blatHuge implementation diff --git src/blat/test/intron50k/expected/test3.psl src/blat/test/intron50k/expected/test3.psl deleted file mode 100644 index 51b5e03..0000000 --- src/blat/test/intron50k/expected/test3.psl +++ /dev/null @@ -1,8 +0,0 @@ -psLayout version 3 - -match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts - match match count bases count bases name size start end name size start end count ---------------------------------------------------------------------------------------------------------------------------------------------------------------- -200 0 0 0 0 0 0 0 + query 600 0 200 chr16part 100000 10000 10200 1 200, 0, 10000, -263 4 0 0 2 132 2 2360 + query 600 0 399 chr16part 100000 57772 60399 3 27,41,199, 0,52,200, 57772,57852,60200, -201 0 0 0 0 0 0 0 + query 600 399 600 chr16part 100000 70599 70800 1 201, 399, 70599,