b31907d700c1fe956e4e4c20e64d91de027d7c84
markd
  Tue May 14 02:03:33 2024 -0700
merge blatHuge implementation

diff --git src/gfServer/tests/bin/testDynServerPcr src/gfServer/tests/bin/testDynServerPcr
new file mode 100755
index 0000000..8909f83
--- /dev/null
+++ src/gfServer/tests/bin/testDynServerPcr
@@ -0,0 +1,22 @@
+#!/bin/bash -e
+set -beEu -o pipefail
+if [ $# != 1 ] ; then
+    echo "wrong # args $0 gfServer" >&2
+    exit 1
+fi
+testName=$(basename $0)
+gfServer=$1
+
+# build index
+gfRootDir=output/${testName}_root
+gfDir=${gfRootDir}/${testName}
+rm -rf $gfDir
+mkdir -p $gfDir
+cp -f input/testPcr.2bit $gfDir/testPcr.2bit
+$gfServer index -stepSize=5 $gfDir/testPcr.untrans.gfidx $gfDir/testPcr.2bit >/dev/null
+
+# test query
+
+./dynTester --gfServer=${gfServer} $gfRootDir pcr testPcr testDynServerPcr input/testPcr.fa output/${testName}.ver.out
+sed -e 's/^version .*$/version XXX/' output/${testName}.ver.out > output/${testName}.out
+diff -u expected/${testName}.out output/${testName}.out