b31907d700c1fe956e4e4c20e64d91de027d7c84 markd Tue May 14 02:03:33 2024 -0700 merge blatHuge implementation diff --git src/gfServer/tests/testIndexFile src/gfServer/tests/testIndexFile deleted file mode 100755 index beba356..0000000 --- src/gfServer/tests/testIndexFile +++ /dev/null @@ -1,14 +0,0 @@ -#!/bin/bash -e - -# build index -gfIdx=output/creaGeno.untrans.gfidx -rm -f $gfIdx -mkdir -p output -gfServer index $gfIdx input/creaGeno.2bit >/dev/null - -# read index -gfServer start -indexFile=$gfIdx localhost 17768 -canStop input/creaGeno.2bit >/dev/null & -sleep 1 -gfServer query localhost 17768 input/mCrea.mrna > output/testIndexFile.out -gfServer stop localhost 17768 > /dev/null -diff -u expected/testIndexFile.out output/testIndexFile.out