4ac9486a77f0ed4e87de2e946f29e203b354398b markd Thu Jun 13 13:56:46 2024 -0700 added chainToBigChain command diff --git src/hg/utils/chainToBigChain/makefile src/hg/utils/chainToBigChain/makefile new file mode 100644 index 0000000..970202a --- /dev/null +++ src/hg/utils/chainToBigChain/makefile @@ -0,0 +1,54 @@ +COPT=-ggdb +kentSrc = ../../.. +A = chainToBigChain +include $(kentSrc)/inc/userApp.mk + +cgi:: compile + chmod a+rx $A${EXE} + @if [ ! -d "${CGI_BIN}-${USER}/loader" ]; then \ + ${MKDIR} ${CGI_BIN}-${USER}/loader; \ + fi + rm -f ${CGI_BIN}-${USER}/loader/$A + mv $A${EXE} ${CGI_BIN}-${USER}/loader/$A + for F in ${SQL_FILES}; do \ + B=`basename $$F` ; \ + rm -f ${DESTDIR}${CGI_BIN}-${USER}/loader/$$B ; \ + cp -p $$F ${DESTDIR}${CGI_BIN}-${USER}/loader/$$B ; \ + done + +alpha:: strip + @if [ ! -d "${CGI_BIN}/loader" ]; then \ + ${MKDIR} ${CGI_BIN}/loader; \ + fi + rm -f ${CGI_BIN}/loader/$A + mv $A${EXE} ${CGI_BIN}/loader/$A + for F in ${SQL_FILES}; do \ + B=`basename $$F` ; \ + rm -f ${DESTDIR}${CGI_BIN}/loader/$$B ; \ + cp -p $$F ${DESTDIR}${CGI_BIN}/loader/$$B ; \ + done + +beta:: strip + @if [ ! -d "${CGI_BIN}-beta/loader" ]; then \ + ${MKDIR} ${CGI_BIN}-beta/loader; \ + fi + rm -f ${CGI_BIN}-beta/loader/$A + mv $A${EXE} ${CGI_BIN}-beta/loader/$A + for F in ${SQL_FILES}; do \ + B=`basename $$F` ; \ + rm -f ${DESTDIR}${CGI_BIN}-beta/loader/$$B ; \ + cp -p $$F ${DESTDIR}${CGI_BIN}-beta/loader/$$B ; \ + done + +strip:: compile + ${STRIP} $A${EXE} + chmod g+w $A${EXE} + chmod a+rx $A${EXE} + +debug:: $O + ${CC} $O ${MYLIBS} ${L} + mv ${AOUT} $A${EXE} + +clean:: + rm -f $O $A${EXE} tests/bed.tab +