Commits for max

v467_preview to v467_preview2 (2024-06-10 to 2024-06-17) v467

cf699e14f89d5306a6d136facca8f135f3d81814 Tue Jun 11 05:09:42 2024 -0700

• adding decorator help text, no redmine, email with Mark and Jonathan
  • src/hg/lib/decoratorUi.c - lines changed 5, context: html, text, full: html, text

f66ab9141018bb7d7e5f889489cd77eebfb06404 Tue Jun 11 06:22:57 2024 -0700

• extending primer3 max seq size
  • src/hg/hgTracks/extTools.ra - lines changed 1, context: html, text, full: html, text

b3d121a8a7def35ab27b02fd119440a687f2ec15 Wed Jun 12 06:04:29 2024 -0700

• Revert "extending primer3 max seq size". Primer3 really has a hard 10kb limit. This reverts commit f66ab9141018bb7d7e5f889489cd77eebfb06404.
  • src/hg/hgTracks/extTools.ra - lines changed 1, context: html, text, full: html, text

bf337e7ac5646c4a7f7d19a8d577eeff63e27c22 Thu Jun 13 01:16:49 2024 -0700

• changing DNA to DNA sequence in menu, email from user and ML ticket by Sandy Sharp, refs #33589
  • src/hg/hgTracks/menu.c - lines changed 1, context: html, text, full: html, text

04e01b72c197e97a044533aaba91fb328061615a Thu Jun 13 02:28:49 2024 -0700

• outputting defined and extra fields in bigBedInfo, no redmine, needed later for hubMake and bedmethyl support
  • src/utils/bigBedInfo/bigBedInfo.c - lines changed 2, context: html, text, full: html, text

5add048a3ba033e17e6c0f5643e9985ef8a15f44 Thu Jun 13 02:59:16 2024 -0700

• adding legend under cigar display on bam hgc page, refs #33292
  • src/hg/hgc/bamClick.c - lines changed 10, context: html, text, full: html, text

6e18f171e1ea3a6bf1f09e7b3eea96936fe11fc1 Thu Jun 13 05:06:33 2024 -0700

• initial commit for knownGene NMD decorators, refs #33737
  • src/hg/makeDb/trackDb/human/hg38/knownGene.alpha.ra - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 1, context: html, text, full: html, text

c4d3223408b33ddadb3f0ca8b5e492bb3773b868 Fri Jun 14 02:45:33 2024 -0700

• restoring title from recommended track sets window, refs #33974
  • src/hg/js/hgTracks.js - lines changed 2, context: html, text, full: html, text

5ee63c17bf3324e22fba3ab16c2bb21415b102d7 Fri Jun 14 07:00:44 2024 -0700

• increasing buffer for connected hubs, refs #33973
  • src/hg/lib/web.c - lines changed 16, context: html, text, full: html, text

a9e106ea5ddcac6b0eb1a25ad7b50b4d98b2f84e Fri Jun 14 07:02:18 2024 -0700

• forgot to include file in previous commit, accidentally committed code that should have been in a separate commit, for genome-china, no redmine
  • src/hg/inc/web.h - lines changed 3, context: html, text, full: html, text