Commits for jcasper

8b84dbd02901e6288237476bb410eaa6199518fb Mon Jun 24 16:30:00 2024 -0700

Updating knownGene HTML color descriptions to include a mention of MANE, refs #33479
- src/hg/makeDb/trackDb/human/hg38/knownGeneV46.html - lines changed 3, context: html, text, full: html, text

f792205c4ed7244a9ce7db761de77f21f1af7307 Mon Jun 24 16:32:07 2024 -0700

KnownGene pipeline will now mark MANE transcripts in a separate color, refs #33479
- src/hg/utils/otto/knownGene/buildCore.sh - lines changed 6, context: html, text, full: html, text

69dcf9c335101bd27b2522a12ba4fed0650f0657 Tue Jun 25 15:31:51 2024 -0700

Replacing DOS CRLF with Unix-style to clear some build warnings, no ticket
- src/hg/htdocs/cauldron/breakTable.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/makeDb/outside/bayesDel/hg19/createMaxAFBayesDelWig.py - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/makeDb/outside/bayesDel/hg19/createNoAFBayesDelWig.py - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)

c9aa9c0f8bd30426080ca5a2d5546d1f05befe9b Wed Jun 26 15:51:39 2024 -0700

Fix for drawing wrong exon numbers in codon mouseovers, refs #33742
- src/hg/hgTracks/simpleTracks.c - lines changed 29, context: html, text, full: html, text

b80b2f6a0b21b3379d3c38d2168d6c103cb3ee75 Mon Jul 1 10:12:07 2024 -0700

v468 preview1, refs #33949
- src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text