9418b6ff8004c4aea32c66cfb58cb821a072f94d lrnassar Thu Jun 27 17:30:26 2024 -0700 Adding dataVersion and consistent Broad wording as per feedback from Max refs #27141 diff --git src/hg/makeDb/trackDb/human/spliceAI.html src/hg/makeDb/trackDb/human/spliceAI.html index c45f756..7859a07 100644 --- src/hg/makeDb/trackDb/human/spliceAI.html +++ src/hg/makeDb/trackDb/human/spliceAI.html @@ -2,31 +2,31 @@

Description

SpliceAI is an open-source deep learning splicing prediction algorithm that can predict splicing alterations caused by DNA variations. Such variants may activate nearby cryptic splice sites, leading to abnormal transcript isoforms. SpliceAI was developed at Illumina; a lookup tool is provided by the Broad institute.

Important: The SpliceAI data on the UCSC Genome Browser is directly from Illumina (See Data Access below). However, since SpliceAI refers to the algorithm, and not the computed dataset, -the data on the BROAD server or other sources may have some differences between them. +the data on the Broad server or other sources may have some differences between them.

Display Conventions and Interpretation

Variants are colored by their predicted effects:

Mouseover on items shows the variant, gene name, type of change (donor gain/loss, acceptor gain/loss), location of affected cryptic splice, and spliceAI score. Clicking on any item brings up a table with this information.