9418b6ff8004c4aea32c66cfb58cb821a072f94d
lrnassar
Thu Jun 27 17:30:26 2024 -0700
Adding dataVersion and consistent Broad wording as per feedback from Max refs #27141
diff --git src/hg/makeDb/trackDb/human/spliceAI.ra src/hg/makeDb/trackDb/human/spliceAI.ra
index d6771fb..49b850d 100644
--- src/hg/makeDb/trackDb/human/spliceAI.ra
+++ src/hg/makeDb/trackDb/human/spliceAI.ra
@@ -1,76 +1,77 @@
track spliceAI
superTrack on
shortLabel SpliceAI
longLabel SpliceAI: Splice Variant Prediction Score
group phenDis
type bigBed 9 +
tableBrowser off
+dataVersion Illumina SpliceAI Score v1.3
pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "Xxx Xx, 2024"
track spliceAIsnvs
type bigBed 9 +
priority 1
shortLabel SpliceAI SNVs
longLabel SpliceAI SNVs (unmasked)
superTrack spliceAI pack
tableBrowser off
bigDataUrl /gbdb/$D/bbi/spliceAIsnvs.bb
itemRgb on
noScoreFilter on
filterValues.spliceType donor_gain|Donor gain,donor_loss|Donor loss,acceptor_gain|Acceptor gain,acceptor_loss|Acceptor loss
filterLabel.spliceType Splice type
filter.AIscore 0.02
filterLimits.AIscore 0.02:1
mouseOver Change: $name
Gene: $gene
Type of change:$spliceType
Affected splice location: $relativePos
Score: $AIscore
html spliceAI
track spliceAIindels
priority 2
type bigBed 9 +
shortLabel SpliceAI indels
longLabel SpliceAI Indels (unmasked)
superTrack spliceAI dense
tableBrowser off
bigDataUrl /gbdb/$D/bbi/spliceAIindels.bb
itemRgb on
noScoreFilter on
filterValues.spliceType donor_gain|Donor gain,donor_loss|Donor loss,acceptor_gain|Acceptor gain,acceptor_loss|Acceptor loss
filterLabel.spliceType Splice type
filter.AIscore 0.02
filterLimits.AIscore 0.02:1
mouseOver Change: $name
Gene: $gene
Type of change:$spliceType
Affected splice location: $relativePos
Score: $AIscore
html spliceAI
track spliceAIsnvsMasked
priority 3
type bigBed 9 +
shortLabel SpliceAI SNVs (masked)
longLabel SpliceAI SNVs (masked)
superTrack spliceAI hide
tableBrowser off
bigDataUrl /gbdb/$D/bbi/spliceAIsnvsMasked.bb
itemRgb on
noScoreFilter on
filterValues.spliceType donor_gain|Donor gain,donor_loss|Donor loss,acceptor_gain|Acceptor gain,acceptor_loss|Acceptor loss
filterLabel.spliceType Splice type
filter.AIscore 0.02
filterLimits.AIscore 0.02:1
mouseOver Change: $name
Gene: $gene
Type of change:$spliceType
Affected splice location: $relativePos
Score: $AIscore
html spliceAI
track spliceAIindelsMasked
priority 4
type bigBed 9 +
shortLabel SpliceAI indels (masked)
longLabel SpliceAI Indels (masked)
superTrack spliceAI hide
tableBrowser off
bigDataUrl /gbdb/$D/bbi/spliceAIindelsMasked.bb
itemRgb on
noScoreFilter on
filterValues.spliceType donor_gain|Donor gain,donor_loss|Donor loss,acceptor_gain|Acceptor gain,acceptor_loss|Acceptor loss
filterLabel.spliceType Splice type
filter.AIscore 0.02
filterLimits.AIscore 0.02:1
mouseOver Change: $name
Gene: $gene
Type of change:$spliceType
Affected splice location: $relativePos
Score: $AIscore
html spliceAI