505da6cd60ae9dc005b085a2e713ccbf4e7e808a lrnassar Thu Jul 18 09:31:36 2024 -0700 Adding a dbSNP search example to the query page. Refs #34128 diff --git src/hg/htdocs/goldenPath/help/query.html src/hg/htdocs/goldenPath/help/query.html index 05914e2..478cfc1 100755 --- src/hg/htdocs/goldenPath/help/query.html +++ src/hg/htdocs/goldenPath/help/query.html @@ -174,30 +174,33 @@ <tr> <td>essv8694097</td> <td>Displays the region covering the copy number variant with the accession essv8694097 in the Database of Genomic Variants (DGV)</td></tr> <tr> <td>nssv3446126</td> <td>Displays the region covering the copy number variant with the accession nssv3446126 in the cases of developmental delay</td></tr> <tr> <td>CTD-3071L10</td> <td>Displays the region covering the CTD-3071L10 NCBI clone end mapping in the NCBI Clone DB database</td></tr> <tr> <td>nssv16167444</td> <td>Displays the region covering the common copy number genomic variant with the accession nssv16167444 in the nstd186 (NCBI Curated Common Structural Variants) dataset</td></tr> <tr> + <td>rs1333049</td> + <td>Displays the matching SNV from the dbSNP database. rs1333049 is a variant associated with coronary heart disease</td></tr> + <tr> <td>COSM6161404</td> <td>Displays the region covering COSM6161404 in the Catalogue Of Somatic Mutations In Cancer (COSMIC) database</td></tr> <tr> <td>nssv3395351</td> <td>Displays the region covering ClinVar Copy Number Variant with the accession nssv3395351 in the ClinVar database</td></tr> <tr> <td>BRCT_assoc</td> <td>Displays the region covering the manually-curated Pfam-A domain BRCT_assoc found in GENCODE Genes</td></tr> <tr> <td>U133A:219211_at</td> <td>Displays the region containing the consensus and exemplar sequences used for the selection of probes on the Affymetrix HG-U133A chips</td></tr> <tr> <td>chr1 0 1000</td> <td>When entered without ":" and "-", uses 0-based, half-open coordinates (like custom tracks and internal table coordinates), so displays chr1:1-1000</td> </tr>