Commits for jcasper

v470_preview to v470_preview2 (2024-08-12 to 2024-08-19) v470

403e6092c8f4d9bd86c8f78292677997a9adcf89 Mon Aug 12 15:04:16 2024 -0700

• Adding warning about changing hReplaceGbdb affecting straw, refs #27851
  • src/hg/inc/hdb.h - lines changed 7, context: html, text, full: html, text

61baacb2558c51f93fe4219337d4b5a0b21a6faa Tue Aug 13 22:16:36 2024 -0700

• hgGene will start linking to our ncbiRefSeq track instead of refGene, refs #34291
  • src/hg/hgGene/synonym.c - lines changed 21, context: html, text, full: html, text

67b9ab362ade34958f9da38f4a92c8263ba8c31c Thu Aug 15 15:39:34 2024 -0700

• VM36 knownGene trackDb
  • src/hg/makeDb/trackDb/mouse/mm39/knownGene.alpha.ra - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/knownGeneVM36.html - lines changed 123, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra - lines changed 2, context: html, text, full: html, text

1f733e2211b1f5f6d1c279a117f26d9e058dfdae Thu Aug 15 15:42:48 2024 -0700

• Adding VM35 knownGene to knownGene Archive, refs #34218
  • src/hg/makeDb/trackDb/mouse/mm39/knownGeneArchive.ra - lines changed 22, context: html, text, full: html, text

5c6591502a68acc328ae00d0cbc31a61891fa9f9 Fri Aug 16 08:31:23 2024 -0700

• Makedoc for knownGene VM36 on mm39, refs #34218
  • src/hg/makeDb/doc/ucscGenes/mm39.gencodeVM36.sh - lines changed 52, context: html, text, full: html, text

632d91991149700af031438008b9270e366cf830 Fri Aug 16 11:01:01 2024 -0700

• Adds support for multiple filterBy sets on the same page, refs #32644
  • src/hg/lib/hui.c - lines changed 10, context: html, text, full: html, text

08ec0b5265b884be1c7885ebe73db95515beca0d Fri Aug 16 11:27:45 2024 -0700

• Basic support for multiple decorators, refs #32644
  • src/hg/hgTracks/hgTracks.c - lines changed 18, context: html, text, full: html, text
  • src/hg/inc/decoratorUi.h - lines changed 4, context: html, text, full: html, text
  • src/hg/lib/decoratorUi.c - lines changed 58, context: html, text, full: html, text

a051ecbf26183d97dd114d7f19f5f6130536f9f8 Fri Aug 16 12:16:29 2024 -0700

• decorator UI should now respect trackDb settings for blockMode and glyphMode. Also removed an unused variable. refs #34111
  • src/hg/lib/decoratorUi.c - lines changed 18, context: html, text, full: html, text

6947d7ff8ae17c3ea851323cc5ca05257fa63d78 Sun Aug 18 01:11:24 2024 -0700

• Installing updated hg.conf files from UCSC servers
  • confs/asia.hg.conf - lines changed 3, context: html, text, full: html, text
  • confs/euro.hg.conf - lines changed 3, context: html, text, full: html, text
  • confs/hgwbeta.hg.conf - lines changed 2, context: html, text, full: html, text
  • confs/rr.hg.conf - lines changed 3, context: html, text, full: html, text

03a1deed0d7a3f41f11c49bd49f6aee070ea49ba Mon Aug 19 11:25:30 2024 -0700

• v470 preview2, refs #34278
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text