898fdeaa1667f0840890881a70f6ad37d9d0a0d6
lrnassar
  Fri Sep 13 13:14:15 2024 -0700
Reverting Max's change because it was breaking sequence table browser output, refs #33415

diff --git src/hg/hgTables/seqOut.c src/hg/hgTables/seqOut.c
index 89377e2..4f97e90 100644
--- src/hg/hgTables/seqOut.c
+++ src/hg/hgTables/seqOut.c
@@ -1,29 +1,28 @@
 /* seqOut - Output sequence. */
 
 /* Copyright (C) 2013 The Regents of the University of California 
  * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "htmshell.h"
 #include "cheapcgi.h"
 #include "cart.h"
 #include "jksql.h"
 #include "hdb.h"
-#include "hgConfig.h"
 #include "web.h"
 #include "hui.h"
 #include "hdb.h"
 #include "trackDb.h"
 #include "customTrack.h"
 #include "hgSeq.h"
 #include "hgTables.h"
 #include "genbank.h"
 
 
 static char *genePredMenu[] =
     {
     "genomic",
     "protein",
     "mRNA",
@@ -50,68 +49,55 @@
 char *dupType = cloneString(type);
 char *typeWords[3];
 int typeWordCount, typeIx;
 
 /* Type field has 1-3 words which are in order:
  *     genePred pepTable mrnaTable */
 typeWordCount = chopLine(dupType, typeWords);
 /* TypeIx will be 0 (genomic) 1 (protein) 2(mrna). */
 typeIx = stringArrayIx(predType, genePredMenu, typeWordCount);
 if (typeIx < 0)
     predType = genePredMenu[0];
 htmlOpen("Select sequence type for %s", track->shortLabel);
 hPrintf("<FORM ACTION=\"%s\" METHOD=GET>\n", getScriptName());
 cartSaveSession(cart);
 
-for (struct cgiVar *vars = cgiVarList(); vars!=NULL; vars=vars->next)
-    {
-    //if ((sameOk(vars->name, hgtaDoTopSubmit)) || (sameOk(vars->name, hgtaDoCurl) || sameOk(vars->name, hgtaDoCurlSelected)))
-        //continue;
-    
-    cgiMakeHiddenVar(vars->name, vars->val);
-    }
-
 if (isRefGeneTrack(track->table))
     {
     /* RefGene covers all 3 types, but in it's own way. */
     for (typeIx = 0; typeIx < 3; ++typeIx)
 	{
 	genePredTypeButton(genePredMenu[typeIx], predType);
 	hPrintf(" %s<BR>\n", genePredMenu[typeIx]);
 	}
     }
 else
     {
     /* Otherwise we always have genomic, and we have
      * peptide/mrna only if there are corresponding table
      * in the type field. */
     for (typeIx = 0; typeIx < typeWordCount; ++typeIx)
 	{
 	if (typeIx == 0 || sqlTableExists(conn, typeWords[typeIx]))
 	    {
 	    genePredTypeButton(genePredMenu[typeIx], predType);
 	    hPrintf(" %s<BR>\n", genePredMenu[typeIx]);
 	    }
 	}
     }
 cgiMakeButton(hgtaDoGenePredSequence, "submit");
 hPrintf(" ");
-if (cfgOptionBooleanDefault("curl", 0))
-    {
-    cgiMakeButton(hgtaDoCurlGenePredSequence, "get curl command");
-    hPrintf(" ");
-    }
 cgiMakeButton(hgtaDoMainPage, "cancel");
 hPrintf("</FORM>\n");
 cgiDown(0.9);
 htmlClose();
 freez(&dupType);
 }
 
 
 void doRefGeneProteinSequence(struct sqlConnection *conn, struct bed *bedList)
 /* Fetch refGene proteins corresponding to names in bedList. */
 {
 struct hash *uniqHash = newHash(18);
 struct hash *protHash = newHash(18);
 struct sqlResult *sr;
 char **row;