8ecd4ec7a45dc9f84f487d829b648f69c05fa862
hiram
  Wed Aug 28 15:11:22 2024 -0700
adding four columns to the database table for more accurate search refs #32596

diff --git src/hg/lib/assemblyList.sql src/hg/lib/assemblyList.sql
index 31d308d..af4c319 100644
--- src/hg/lib/assemblyList.sql
+++ src/hg/lib/assemblyList.sql
@@ -2,19 +2,23 @@
 # generated assemblyList.c and assemblyList.h.  This creates the database representation of
 # an object which can be loaded and saved from RAM in a fairly 
 # automatic way.
 
 #listing all UCSC genomes, and all NCBI assemblies, with search priority, and status if browser available or can be requested
 CREATE TABLE assemblyList (
     name varchar(255),	# UCSC genome: dbDb name or GenArk/NCBI accession
     priority int unsigned,	# assigned search priority
     commonName varchar(511),	# a common name
     scientificName varchar(511),	# binomial scientific name
     taxId int unsigned,	# Entrez taxon ID: www.ncbi.nlm.nih.gov/taxonomy/?term=xxx
     clade varchar(255),	# approximate clade: primates mammals birds fish ... etc ...
     description varchar(1023),	# other description text
     browserExists tinyint unsigned,	# 1 == this assembly is available at UCSC, 0 == can be requested
     hubUrl varchar(511),	# path name to hub.txt: GCF/000/001/405/GCF_000001405.39/hub.txt
-    FULLTEXT gIdx (name, commonName, scientificName, clade, description),
+    year int unsigned,	# year of assembly construction
+    refSeqCategory varchar(31),	# one of: reference, representative or na
+    versionStatus varchar(15),	# one of: latest, replaced or suppressed
+    assemblyLevel varchar(15),	# one of: complete, chromosome, scaffold or contig
+    FULLTEXT gIdx (name, commonName, scientificName, clade, description, refSeqCategory, versionStatus, assemblyLevel),
               #Indices
     PRIMARY KEY(name)
 );