45337f0f68ec7ec4e44183884dde67e81163ec67
jcasper
  Mon Aug 26 16:07:20 2024 -0700
More updates for soe hostname deprecation, no ticket

diff --git src/browserbox/root/updateBrowser.sh src/browserbox/root/updateBrowser.sh
index ad3ea9b..7d8e491 100755
--- src/browserbox/root/updateBrowser.sh
+++ src/browserbox/root/updateBrowser.sh
@@ -338,34 +338,34 @@
     	htmlExt="-"$dirExt
     fi
 
     RSYNCAPACHE="$RSYNCOPTS --delete"
 
      # remove a lot of clutter that accumulated in hgwdev's alpha cgi-bin dir
     if [ "$dirExt" == "alpha" ] ; then
       RSYNCAPACHE="$RSYNCAPACHE --exclude ENCODE/**.pdf --exclude *.gz --exclude *.bw --exclude *.bb --exclude *.bam --exclude goldenPath/**.pdf --exclude admin/** --exclude goldenPath/customTracks/** --exclude pubs/** --exclude ancestors/** --exclude training/** --exclude trash --exclude style-public/** --exclude js-public/** --exclude **/edw* --exclude images/mammalPsg/** --exclude **/encodeTestHub* --exclude favicon.ico --exclude folders --exclude ENCODE/** --exclude ENCODE/** --exclude Neandertal/** --exclude gbib/** --exclude generator/** --exclude js-*/** --exclude js/*/* --exclude .\* --exclude x86_64/* --exclude .xauth --exclude .hg.conf --exclude hgHeatmap* --exclude hg.conf --exclude 'hgt/**' --exclude admin/** --exclude images --exclude trash --exclude edw* --exclude visiGeneData/** --exclude crom_dir/ --exclude testp/ --exclude *.exe --exclude *.old --exclude *.tmp --exclude *.bak --exclude test* --exclude hg.conf* --exclude **/hgHeatmap* --exclude ~* --exclude Intronerator** --exclude hgText --exclude hgSubj --exclude gisaid* --exclude nt4.dir --exclude qaPush* --exclude docIdView --exclude ct/ --exclude *.bak --exclude hg.conf* --exclude gsid*/ --exclude *.private --exclude useCount --exclude ~* --exclude lssnp/ --exclude hg.conf.local"
     fi
   
     # remove things that are on hgwdev beta directories but not necessary on the gbib
     if [ "$dirExt" == "beta" ] ; then
       RSYNCAPACHE="$RSYNCAPACHE --exclude favicon*.ico --exclude hg.conf* --exclude ENCODE --exclude *.gz --exclude *.bw --exclude *.bb --exclude *.bam --exclude goldenPath/**.pdf --exclude admin --exclude goldenPath/customTracks --exclude pubs --exclude ancestors --exclude training --exclude trash --exclude .htaccess --exclude htdocs --exclude Neandertal --exclude RNA-img --exclude ebola --exclude encodeDCC --exclude evoFold --exclude geneExtra --exclude js-public --exclude style-public --exclude hgNearData --exclude visiGeneData --exclude visiGene"
     fi
 
-    rsync $RSYNCAPACHE $user@hgwdev.soe.ucsc.edu:/usr/local/apache/htdocs${htmlExt}/ /usr/local/apache/htdocs/
-    rsync $RSYNCAPACHE $user@hgwdev.soe.ucsc.edu:/usr/local/apache/cgi-bin${cgiExt}/ /usr/local/apache/cgi-bin/
+    rsync $RSYNCAPACHE $user@hgwdev.gi.ucsc.edu:/usr/local/apache/htdocs${htmlExt}/ /usr/local/apache/htdocs/
+    rsync $RSYNCAPACHE $user@hgwdev.gi.ucsc.edu:/usr/local/apache/cgi-bin${cgiExt}/ /usr/local/apache/cgi-bin/
 
-    PUSHLOC=$user@hgwdev.soe.ucsc.edu:/usr/local/apache/htdocs/gbib/push/
+    PUSHLOC=$user@hgwdev.gi.ucsc.edu:/usr/local/apache/htdocs/gbib/push/
 
 # normal public updates from hgdownload are easier, not many excludes necessary
 else
 
     # update CGIs
     echo - Updating CGIs...
     rsync --delete -u $RSYNCOPTS $RSYNCSRC/$RSYNCCGIBIN /data/cgi-bin/ --exclude=hg.conf --exclude=hg.conf.local --exclude edw* --exclude *private --exclude hgNearData --exclude visiGeneData --exclude Neandertal 
 
     echo - Updating HTML files...
     # not using -u because we had a case with a 0-byte html page that was 
     # not updated anymore in #18337
     rsync --delete $RSYNCOPTS $RSYNCSRC/$RSYNCHTDOCS/ /data/htdocs/ --include **/customTracks/*.html --exclude ENCODE/ --exclude *.bam --exclude *.bb --exclude */*.bw --exclude */*.gz --exclude favicon.ico --exclude folders --exclude ancestors --exclude admin --exclude goldenPath/customTracks --exclude images/mammalPsg --exclude style/gbib.css --exclude images/title.jpg --exclude images/homeIconSprite.png --exclude goldenPath/**.pdf --exclude training
 
     PUSHLOC=hgdownload.soe.ucsc.edu::gbib/push/
 fi