bbd23e87bdbc50a9ee58c32982ff7987cb943af6 lrnassar Tue Sep 3 08:58:25 2024 -0700 Removing these tracks from internal trackDb since they are to be released only as public hubs refs #34352 diff --git src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra deleted file mode 100644 index 3196f74..0000000 --- src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra +++ /dev/null @@ -1,70 +0,0 @@ -track enigma -superTrack on -group phenDis -shortLabel ENIGMA BRCA1/BRCA2 specs 1.1.0 -longLabel ENIGMA BRCA1/BRCA2 Panel Specifications of ACMG/AMP Guidelines version 1.1.0 -pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "New Xxx. XX, XXX" - -track BRCAclinDomains -shortLabel BRCA1/BRCA2 protein domains 1.1.0 -longLabel BRCA1/BRCA2 ENIGMA clinically relevant protein domains (ENIGMA specs version 1.1.0) -superTrack enigma hide -priority 1 -visibility pack -type bigBed 9 + 4 -itemRgb on -mouseOverField _mouseOver -bigDataUrl /gbdb/$D/bbi/enigma/BRCAclinDomains.bb -noScoreFilter on -html enigma - -track BRCAexonWeights -shortLabel BRCA1/BRCA2 exon weights 1.1.0 -longLabel BRCA1/BRCA2 exon-specific weights for PM5_PTC code (ENIGMA specs version 1.1.0) -superTrack enigma hide -priority 2 -visibility pack -type bigBed 8 + 15 -mouseOverField _mouseOver -bigDataUrl /gbdb/$D/bbi/enigma/BRCAexonWeights.bb -noScoreFilter on -html enigma - -track BRCAfunctionalAssays -shortLabel BRCA1/BRCA2 functional assays 1.1.0 -longLabel BRCA1/BRCA2 reviewed functional assays for PS3 and BS3 codes (ENIGMA specs version 1.1.0) -superTrack enigma hide -priority 3 -visibility pack -type bigBed 9 + 15 -itemRgb on -mouseOverField _mouseOver -bigDataUrl /gbdb/$D/bbi/enigma/BRCAfunctionalAssays.bb -noScoreFilter on -html enigma - -track BRCAsplicing -shortLabel BRCA1/BRCA2 splicing 1.1.0 -longLabel BRCA1/BRCA2 variant codes according to PVS1 decision trees (ENIGMA specs version 1.1.0) -superTrack enigma hide -priority 4 -visibility pack -type bigBed 9 + 9 -itemRgb on -mouseOverField _mouseOver -bigDataUrl /gbdb/$D/bbi/enigma/BRCAsplicing.bb -noScoreFilter on -html enigma - -track BRCAmla -shortLabel BRCA1/BRCA2 likelihood for PP4 and BP5 -longLabel BRCA1/BRCA2 multifactorial likelihood analysis for PP4 and BP5 ACMG codes (Parsons et al. 2019) -superTrack enigma hide -priority 5 -visibility pack -type bigBed 9 + 67 -itemRgb on -mouseOverField _mouseOver -bigDataUrl /gbdb/$D/bbi/enigma/BRCAmfa.bb -noScoreFilter on -html enigma