8f29deda5ff897fbf1d208907ac7f734afc07ed2 jcasper Tue Oct 1 20:31:17 2024 -0700 Many liftOver functions now have a preserveInput argument, which appends the input position to the name field. This makes it easier to see what got mapped where. The option is made available through a command-line argument to the liftOver utility and a checkbox in the hgLiftOver CGI, refs #28023 diff --git src/hg/liftOver/tests/expected/bed12Preserve.bed src/hg/liftOver/tests/expected/bed12Preserve.bed new file mode 100644 index 0000000..fb5e48d --- /dev/null +++ src/hg/liftOver/tests/expected/bed12Preserve.bed @@ -0,0 +1,2 @@ +chr9 105741156 105745696 chr9:133474580-133479133:example 0 - 105741156 105741156 0 2 2651,877, 0,3663, +chr9 105741156 105744869 chr9:133474580-133479133:example 0 - 105741156 105741156 0 4 2651,10,10,10, 0,3663,3683,3703,