8f29deda5ff897fbf1d208907ac7f734afc07ed2 jcasper Tue Oct 1 20:31:17 2024 -0700 Many liftOver functions now have a preserveInput argument, which appends the input position to the name field. This makes it easier to see what got mapped where. The option is made available through a command-line argument to the liftOver utility and a checkbox in the hgLiftOver CGI, refs #28023 diff --git src/hg/liftOver/tests/input/gffPreserve.gff src/hg/liftOver/tests/input/gffPreserve.gff new file mode 100644 index 0000000..790e505 --- /dev/null +++ src/hg/liftOver/tests/input/gffPreserve.gff @@ -0,0 +1,3 @@ +chr22 TeleGene enhancer 10000000 10001000 500 + . touch1 +chr22 TeleGene promoter 10010000 10010100 900 + . touch1 +chr22 TeleGene promoter 10020000 10025000 800 - . touch2