8f29deda5ff897fbf1d208907ac7f734afc07ed2
jcasper
  Tue Oct 1 20:31:17 2024 -0700
Many liftOver functions now have a preserveInput argument, which appends the input
position to the name field.  This makes it easier to see what got mapped where.  The option is made available through a
command-line argument to the liftOver utility and a checkbox in the hgLiftOver CGI, refs #28023

diff --git src/hg/liftOver/tests/input/pslPreserve.psl src/hg/liftOver/tests/input/pslPreserve.psl
new file mode 100644
index 0000000..88d4f8a
--- /dev/null
+++ src/hg/liftOver/tests/input/pslPreserve.psl
@@ -0,0 +1,3 @@
+59 9 0 0 1 823 1 96 +- FS_CONTIG_48080_1 1955 171 1062 chr22 47748585 13073589 13073753 2 48,20,  171,1042,  34674832,34674976,
+59 7 0 0 1 55 1 55 +- FS_CONTIG_26780_1 2825 2456 2577 chr22 47748585 13073626 13073747 2 21,45,  2456,2532,  34674838,34674914,
+59 7 0 0 1 55 1 55 -+ FS_CONTIG_26780_1 2825 2455 2676 chr22 47748585 13073727 13073848 2 45,21,  249,349,  13073727,13073827,