ab8f6667e2e5c6fe1ee0731781f6efa6aef7cd24 kent Tue Oct 1 13:56:01 2024 -0700 Adding fasta to the formats safely ignored. diff --git src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c index ac0e57b..e746c6f 100644 --- src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c +++ src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c @@ -434,30 +434,31 @@ char *ignoredFormats[] = { "idat", "customTrack", "rcc", "kallisto_abundance", "expression_matrix", "bam.bai", "vcf.gz.tbi", "text", "html", "csv", "tsv", "pdf", "png", + "fasta", "unknown", }; void doEnrichments(struct sqlConnection *conn, struct cdwFile *ef, char *path, struct hash *assemblyToTarget) /* Calculate enrichments on for all targets file. The targetList and the * grtList are in the same order. */ { /* Get validFile from database. */ struct cdwValidFile *vf = cdwValidFileFromFileId(conn, ef->id); if (vf == NULL) return; /* We can only work if have validFile table entry */ if (!isEmpty(vf->enrichedIn) && !sameWord(vf->ucscDb, "unknown") && !isEmpty(vf->ucscDb) && !sameWord(vf->format, "unknown"))