9c4464a8b6f85855c9e758f04f0b811403efb64f lrnassar Thu Sep 19 16:00:34 2024 -0700 Adding a new --filter to the pandoc run linking to a file with special cases we want handled by the conversion. This first case takes an image code block and converts it to an html image tag with source and width specified. Refs #30335 diff --git docs/gb101.md docs/gb101.md index c818ab4..7984535 100644 --- docs/gb101.md +++ docs/gb101.md @@ -43,37 +43,42 @@

Interactive Tutorial

Steps you through the basic functionality in the Genome Browser itself.

## Annotated Screenshot +```image +src=../images/annot-screenshot-sarCov2.jpg +width=30% +``` + ![Annotated image of the UCSC Genome Browser Interface](../images/annot-screenshot-sarCov2.jpg) | Item | Explanation | |------|-------------| | Menu | Find BLAH | -(Wee need something below the table otherwise later markdown isn't properly interpreted) +(We need something below the table otherwise later markdown isnt properly interpreted) ## Guided Workthorugh This walkthrough will take you through the basic Genome Browser functionality. By the end of the workthrough you should be able to do these three things: 1. Naviagte the Genome Browser Interface 2. Perform a basic Table Browser query 3. Perform a simple BLAT query ### Genome Browser Basics In this guided walkthrough, we go from selecting our genome (hg38 in this case), to going to our gene of interest (BLAH), to turning off and on some of