7766e881ce9fa7ece509263fd71ecf8459e8c4ac
gperez2
  Wed Oct 9 16:12:57 2024 -0700
Adding release tag for the CADD 1.7 track, refs #33940

diff --git src/hg/makeDb/trackDb/human/cadd.ra src/hg/makeDb/trackDb/human/cadd.ra
index d22c60a..b3cce4e 100644
--- src/hg/makeDb/trackDb/human/cadd.ra
+++ src/hg/makeDb/trackDb/human/cadd.ra
@@ -1,37 +1,37 @@
 track caddSuper
 shortLabel CADD
-longLabel CADD Score for all single-basepair mutations and selected insertions/deletions
+longLabel CADD 1.6 Score for all single-basepair mutations and selected insertions/deletions
 superTrack on hide
 type bed
 visibility hide
 group phenDis
 color 100,130,160
 
 track cadd
-    shortLabel CADD 1.6
+shortLabel CADD
 longLabel CADD 1.6 Score for all possible single-basepair mutations (zoom in for scores)
 type bigWig
 compositeTrack on
 parent caddSuper
-    visibility hide
+visibility dense
 #maxWindowToQuery 500000
 group phenDis
 color 100,130,160
 html caddSuper
 maxWindowToDraw 10000000
-    #mouseOverFunction noAverage
+mouseOverFunction noAverage
 
         track caddA
         shortLabel Mutation: A
         longLabel CADD 1.6 Score: Mutation is A
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/a.bw
         maxHeightPixels 128:20:8
         viewLimits 10:50
         viewLimitsMax 0:100
 
         track caddC
         shortLabel Mutation: C
         longLabel CADD 1.6 Score: Mutation is C
@@ -57,137 +57,44 @@
         track caddT
         shortLabel Mutation: T
         longLabel CADD 1.6 Score: Mutation is T
         type bigWig
         parent cadd on
         visibility dense
         bigDataUrl /gbdb/$D/cadd/t.bw
         maxHeightPixels 128:20:8
         viewLimits 10:50
         viewLimitsMax 0:100
 
 track caddIns
 shortLabel Insertions
 longLabel CADD 1.6 Score: Insertions - label is length of insertion
 type bigBed 9 +
-            parent cadd on
+parent caddSuper
 visibility dense
 bigDataUrl /gbdb/$D/cadd/ins.bb
 mouseOver Mutation: $change CADD Phred score: $phred
 html caddSuper
 filter.score 10:100
 filterByRange.score on
 filterLabel.score Show only items with PHRED scale score of
 filterLimits.score 0:100
 #maxWindowCoverage 40000
 #maxItems 100000
 #maxWindowToDraw 9000000
 
 track caddDel
 shortLabel Deletions
 longLabel CADD 1.6 Score: Deletions - label is length of deletion
 type bigBed 9 +
-            parent cadd on
+parent caddSuper
 visibility dense
 bigDataUrl /gbdb/$D/cadd/del.bb
 mouseOver Mutation: $change CADD Phred score: $phred
 html caddSuper
 filter.score 10:100
 filterByRange.score on
 filterLabel.score Show only items with PHRED scale score of
 filterLimits.score 0:100
 #maxWindowCoverage 40000
 #maxItems 100000
 #maxWindowToDraw 9000000
-    
-    track cadd1_7
-    shortLabel CADD 1.7
-    longLabel CADD 1.7 Score for all possible single-basepair mutations (zoom in for scores)
-    type bigWig
-    compositeTrack on
-    parent caddSuper
-    visibility dense
-    #maxWindowToQuery 500000
-    group phenDis
-    color 100,130,160
-    html caddSuper1.7
-    maxWindowToDraw 10000000
-    #mouseOverFunction noAverage
-    
-            track cadd1_7_A
-            shortLabel Mutation: A
-            longLabel CADD 1.7 Score: Mutation is A
-            type bigWig
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/a.bw
-            maxHeightPixels 128:20:8
-            viewLimits 10:50
-            viewLimitsMax 0:100
-    
-            track cadd1_7_C
-            shortLabel Mutation: C
-            longLabel CADD 1.7 Score: Mutation is C
-            type bigWig
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/c.bw
-            maxHeightPixels 128:20:8
-            viewLimits 10:50
-            viewLimitsMax 0:100
-    
-            track cadd1_7_G
-            shortLabel Mutation: G
-            longLabel CADD 1.7 Score: Mutation is G
-            type bigWig
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/g.bw
-            maxHeightPixels 128:20:8
-            viewLimits 10:50
-            viewLimitsMax 0:100
-    
-            track cadd1_7_T
-            shortLabel Mutation: T
-            longLabel CADD 1.7 Score: Mutation is T
-            type bigWig
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/t.bw
-            maxHeightPixels 128:20:8
-            viewLimits 10:50
-            viewLimitsMax 0:100
-    
-            track cadd1_7_Ins
-            shortLabel Insertions
-            longLabel CADD 1.7 Score: Insertions - label is length of insertion
-            type bigBed 9 +
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/ins.bb
-            mouseOver Mutation: $change CADD Phred score: $phred
-            html caddSuper1.7
-            filter.score 10:100
-            filterByRange.score on
-            filterLabel.score Show only items with PHRED scale score of
-            filterLimits.score 0:100
-            #maxWindowCoverage 40000
-            #maxItems 100000
-            #maxWindowToDraw 9000000
-            
-            track cadd1_7_Del
-            shortLabel Deletions
-            longLabel CADD 1.7 Score: Deletions - label is length of deletion
-            type bigBed 9 +
-            parent cadd1_7 on
-            visibility dense
-            bigDataUrl /gbdb/$D/cadd1.7/del.bb
-            mouseOver Mutation: $change CADD Phred score: $phred
-            html caddSuper1.7
-            filter.score 10:100
-            filterByRange.score on
-            filterLabel.score Show only items with PHRED scale score of
-            filterLimits.score 0:100
-            #maxWindowCoverage 40000
-            #maxItems 100000
-            #maxWindowToDraw 9000000
-