b90835db13500c17be93628a25ec9f54e93036ad markd Thu Oct 17 22:59:40 2024 -0700 import of GENCODE V47 final release diff --git src/hg/makeDb/outside/gencode/gencodeLoad.mk src/hg/makeDb/outside/gencode/gencodeLoad.mk index 88f830a..08624e8 100644 --- src/hg/makeDb/outside/gencode/gencodeLoad.mk +++ src/hg/makeDb/outside/gencode/gencodeLoad.mk @@ -20,35 +20,35 @@ host=$(shell hostname) ppid=$(shell echo $$PPID) tmpExt = ${host}.${ppid}.tmp SHELL = bash -e export SHELLOPTS=pipefail ## # programs, etc ## mach = $(shell uname -m) ## # Release info and files from Sanger. # BEGIN EDIT THESE EACH RELEASE ## -preRelease = yes -#preRelease = no -#db = hg38 +#preRelease = yes +preRelease = no +db = hg38 #db = hg19 -db = mm39 +#db = mm39 ifeq (${db},mm39) ver = M36 prevVer = M35 else ifeq (${db},hg38) ver = 47 prevVer = 46 else ifeq (${db},hg19) verBase = 47 prevVerBase = 46 ver = ${verBase}lift37 else $(error unimplement genome database: ${db}) endif # END EDIT THESE EACH RELEASE