8c2f7318d8d821de9b2a25750586a94ab5e8c1bb lrnassar Fri Nov 15 18:50:19 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/affyAllExonProbes.html src/hg/makeDb/trackDb/affyAllExonProbes.html index b969ebe..87e9453 100644 --- src/hg/makeDb/trackDb/affyAllExonProbes.html +++ src/hg/makeDb/trackDb/affyAllExonProbes.html @@ -101,31 +101,31 @@ PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/8594574" target="_blank">8594574</a>; PMC: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC145607/" target="_blank">PMC145607</a> </p> <P> <B><A HREF="http://eddylab.org" TARGET=_blank>RNA Genes</A>:</B> Lowe TM, Eddy SR. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC146525/pdf/250955.pdf" target="_blank"> tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence</a>. <em>Nucleic Acids Res</em>. 1997 Mar 1;25(5):955-64. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/9023104" target="_blank">9023104</a>; PMC: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC146525/" target="_blank">PMC146525</a> </p> <P> -<B><A HREF="http://grib.imim.es" TARGET=_blank>SGP Genes</A>: </B> +<B><A HREF="https://grib.upf.edu/" TARGET=_blank>SGP Genes</A>: </B> Wiehe T, Gebauer-Jung S, Mitchell-Olds T, Guigó R. <a href="https://genome.cshlp.org/content/11/9/1574.full" target="_blank"> SGP-1: prediction and validation of homologous genes based on sequence alignments</a>. <em>Genome Res</em>. 2001 Sep;11(9):1574-83. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/11544202" target="_blank">11544202</a>; PMC: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC311140/" target="_blank">PMC311140</a> </p> <P> <B><A HREF="https://mblab.wustl.edu/" TARGET=_blank>Twinscan Genes</A>:</B> Korf I, Flicek P, Duan D, Brent MR. <a href="https://academic.oup.com/bioinformatics/article/17/suppl_1/S140/261903" target="_blank"> Integrating genomic homology into gene structure prediction</a>. <em>Bioinformatics</em>. 2001;17 Suppl 1:S140-8. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/11473003" target="_blank">11473003</a>