8c2f7318d8d821de9b2a25750586a94ab5e8c1bb lrnassar Fri Nov 15 18:50:19 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/drosophila/chainApiMel1.html src/hg/makeDb/trackDb/drosophila/chainApiMel1.html index 403a58a..4f95b5c 100644 --- src/hg/makeDb/trackDb/drosophila/chainApiMel1.html +++ src/hg/makeDb/trackDb/drosophila/chainApiMel1.html @@ -43,31 +43,31 @@ alignments between a single $o_organism chromosome and a single $Organism chromosome into a group and creates a kd-tree out of the gapless subsections (blocks) of the alignments. A dynamic program was then run over the kd-trees to find the maximally scoring chains of these blocks. Chains scoring below a threshold were discarded; the remaining chains are displayed in this track.
Blastz was developed at Pennsylvania State University by Minmei Hou, Scott Schwartz, Zheng Zhang, and Webb Miller with advice from Ross Hardison.
Lineage-specific repeats were identified by Arian Smit and his -RepeatMasker +RepeatMasker program.
The axtChain program was developed at the University of California at Santa Cruz by Jim Kent with advice from Webb Miller and David Haussler.
The browser display and database storage of the chains were generated by Robert Baertsch and Jim Kent.
Chiaromonte, F., Yap, V.B., Miller, W. Scoring pairwise genomic sequence alignments. Pac Symp Biocomput 2002, 115-26 (2002).