8c2f7318d8d821de9b2a25750586a94ab5e8c1bb
lrnassar
  Fri Nov 15 18:50:19 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.

diff --git src/hg/makeDb/trackDb/human/dbSnp153Composite.html src/hg/makeDb/trackDb/human/dbSnp153Composite.html
index ae4487c..f2b863c 100644
--- src/hg/makeDb/trackDb/human/dbSnp153Composite.html
+++ src/hg/makeDb/trackDb/human/dbSnp153Composite.html
@@ -148,31 +148,31 @@
     </li>
     <li><a href="https://twinsuk.ac.uk/" target=_blank>TWINSUK</a>:
       The UK10K - TwinsUK project contains 1854 samples from the
       <a href="https://twinsuk.ac.uk/" target=_blank>Department of Twin Research and
       Genetic Epidemiology (DTR)</a>.
       The DTR dataset contains data obtained from the 11,000 identical and non-identical twins
       between the ages of 16 and 85 years old.
     </li>
     <li><a href="https://swefreq.nbis.se/dataset/SweGen" target=_blank>NorthernSweden</a>:
       Whole-genome sequenced control population in northern Sweden reveals subregional
       genetic differences.  This population consists of 300 whole genome sequenced human samples
       selected from the county of Vasterbotten in northern Sweden. To be selected for inclusion
       into the population, the individuals had to have reached at least 80 years of age and have
       no diagnosed cancer.
     </li>
-    <li><a href="http://genomes.vn" target=_blank>Vietnamese</a>:
+    <li><a href="https://genomes.vn/" target=_blank>Vietnamese</a>:
       The Vietnamese Genetic Variation Database includes about 25 million variants (SNVs and indels)
       from 406 genomes and 305 exomes of unrelated healthy Kinh Vietnamese (KHV) people.
     </li>
   </ul>
 The project from which to take allele frequency data defaults to 1000 Genomes
 but can be set to any of those projects.
 </p>
 <p>
 Using the track controls, variants can be filtered by
 
   <ul>
     <li>minimum minor allele frequency (MAF)
     </li>
     <li>variation class/type (e.g. SNV, insertion, deletion)
     </li>
@@ -541,31 +541,31 @@
 <a href="https://github.com/ucscGenomeBrowser/kent/blob/master/src/hg/lib/dbSnpDetails.as"
    target=_blank>dbSnpDetails.as</a> respectively.
 For columns that contain lists of allele frequency data, the order of projects
 providing the data listed is as follows:
 <ol>
   <li><a href="https://www.internationalgenome.org/" target=_blank>1000Genomes</a></li>
   <li><a href="https://gnomad.broadinstitute.org/" target=_blank>GnomAD exomes</a></li>
   <li><a href="https://www.nhlbiwgs.org/" target=_blank>TOPMED</a></li>
   <li><a href="https://www.pagestudy.org/" target=_blank>PAGE STUDY</a></li>
   <li><a href="https://gnomad.broadinstitute.org/" target=_blank>GnomAD genomes</a></li>
   <li><a href="https://esp.gs.washington.edu/" target=_blank>GoESP</a></li>
   <li><a href="https://www.geenivaramu.ee/en" target=_blank>Estonian</a></li>
   <li><a href="http://www.bris.ac.uk/alspac/participants/genome/" target=_blank>ALSPAC</a></li>
   <li><a href="https://twinsuk.ac.uk/" target=_blank>TWINSUK</a></li>
   <li><a href="https://swefreq.nbis.se/dataset/SweGen" target=_blank>NorthernSweden</a></li>
-  <li><a href="http://genomes.vn" target=_blank>Vietnamese</a></li>
+  <li><a href="https://genomes.vn/" target=_blank>Vietnamese</a></li>
 </ol>
 </p><p>
 UCSC also has an
 <a href="../goldenPath/help/api.html"
    target=_blank>API</a>
 that can be used to retrieve values from a particular chromosome range.
 </p><p>
 A list of rs# IDs can be pasted/uploaded in the
 <a href="hgVai" target=_blank>Variant Annotation Integrator</a>
 tool to find out which genes (if any) the variants are located in,
 as well as functional effect such as intron, coding-synonymous, missense, frameshift, etc.
 </p><p>
 Please refer to our searchable
 <A HREF="https://groups.google.com/a/soe.ucsc.edu/forum/?hl=en&fromgroups#!search/download+snps"
 target=_blank>mailing list archives</a>