8c2f7318d8d821de9b2a25750586a94ab5e8c1bb
lrnassar
  Fri Nov 15 18:50:19 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.

diff --git src/hg/makeDb/trackDb/human/encodeEgaspSuper.html src/hg/makeDb/trackDb/human/encodeEgaspSuper.html
index ce2a2a6..93bd5b1 100644
--- src/hg/makeDb/trackDb/human/encodeEgaspSuper.html
+++ src/hg/makeDb/trackDb/human/encodeEgaspSuper.html
@@ -37,31 +37,31 @@
 <A HREF="http://compbio.fmph.uniba.sk/exonhunter/"
 TARGET=_blank>ExonHunter</A></LI>
 <LI>
 <A HREF="http://linux1.softberry.com/berry.phtml" TARGET=_blank>Fgenesh Pseudogenes</A></LI>
 <LI>
 <A HREF="http://linux1.softberry.com/berry.phtml" TARGET=_blank>Fgenesh++</A></LI>
 <LI>
 <A HREF="https://genome.crg.es/software/geneid/index.html"
 TARGET=_blank>GeneID-U12</A> </LI>
 <LI>
 <A HREF="http://opal.biology.gatech.edu/GeneMark/"
 TARGET=_blank>GeneMark</A></LI>
 <LI>
 <A HREF="http://www.genezilla.org/" TARGET=_blank>GeneZilla</A></LI>
 <LI>
-<A HREF="http://www.cbcb.umd.edu/software/jigsaw/" TARGET=_blank>JIGSAW</A></LI>
+<A HREF="https://www.cbcb.umd.edu/software/jigsaw/" TARGET=_blank>JIGSAW</A></LI>
 <LI>
 <A HREF="https://mblab.wustl.edu/software/" TARGET=_blank>Pairagon/N-SCAN</A></LI>
 <LI>
 SAGA</LI>
 <LI>
 <A HREF="https://genome.crg.es/software/sgp2/index.html"
 TARGET=_blank>SGP2-U12</A></LI>
 <LI>
 SPIDA</LI>
 <LI>
 <A HREF="https://mblab.wustl.edu/" TARGET=_blank>Twinscan-MARS</A></LI>
 <LI>
 <A HREF="http://www.pseudogenes.org" TARGET=_blank>Yale pseudogenes</A></LI>
 </UL>
 </P>
@@ -92,41 +92,41 @@
 <B>Exogean:</B> Sarah Djebali, Dyogen Lab,
 <A HREF="https://www.ens.psl.eu/?lang=en" TARGET=_blank>Ecole Normale
 Supérieure</A> (Paris, France).
 <LI>
 <B>ExonHunter:</B> Tomas Vinar, <A HREF="https://cs.uwaterloo.ca/research/research-areas/bioinformatics"
 TARGET=_blank>Waterloo Bioinformatics</A>, School of Computer Science,
 University of Waterloo.
 <LI>
 <B>Fgenesh, Fgenesh++:</B> Victor Solovyev,
 <A HREF="https://www.royalholloway.ac.uk/computerscience/home.aspx"
 TARGET=_blank>Department of Computer Science</A>,
 Royal Holloway, London University.
 <LI>
 <B>GeneID-U12, SGP2-U12:</B> Tyler Alioto,
 Grup de Recerca en Informàtica Biomèdica
-(<A HREF="http://grib.imim.es" TARGET=_blank>GRIB</A>) at
+(<A HREF="https://grib.upf.edu/" TARGET=_blank>GRIB</A>) at
 the Institut Municipal d'Investigació Mèdica (IMIM), Barcelona.
 <LI>
 <B>GeneMark:</B> Mark Borodovsky, Alex Lomsadze and Alexander Lukashin,
 <A HREF="https://biosciences.gatech.edu/" TARGET=_blank>Department of
 Biology</A>, Georgia Institute of Technology.
 <LI>
 <B>JIGSAW:</B>  Jonathan Allen,  Steven Salzberg group, The Institute for
 Genomic Research (<A HREF="https://www.jcvi.org/" TARGET=_blank>TIGR</A>)
 and the Center for Bioinformatics and Computational Biology
-(<A HREF="http://www.cbcb.umd.edu" TARGET=_blank>CBCB</A>) at the
+(<A HREF="https://www.cbcb.umd.edu/" TARGET=_blank>CBCB</A>) at the
 University of Maryland, College Park.
 <LI>
 <B>Pairagon/N-SCAN:</B> Randall Brown, <A HREF="https://mblab.wustl.edu/"
 TARGET=_blank>Laboratory for Computational Genomics</A>, Washington University
 in St. Louis.
 <LI>
 <B>SPIDA:</B> Damian Keefe, Birney Group, <A HREF="https://www.ebi.ac.uk/"
 TARGET=_blank>EMBL-EBI</A>.
 <LI>
 <B>Twinscan:</B> Paul Flicek, Brent Lab,
 <A HREF="https://mblab.wustl.edu/" TARGET=_blank>Washington University
 in St. Louis</A>.
 <LI>
 <B>ACEScan:</B> Gene Yeo, Crick-Jacobs Center for Computational Biology,
 <A HREF="https://www.salk.edu/" TARGET=_blank>Salk Institute</A>.