8c2f7318d8d821de9b2a25750586a94ab5e8c1bb
lrnassar
Fri Nov 15 18:50:19 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
diff --git src/hg/makeDb/trackDb/human/genePredArchive.html src/hg/makeDb/trackDb/human/genePredArchive.html
index 9513958..38b2c37 100644
--- src/hg/makeDb/trackDb/human/genePredArchive.html
+++ src/hg/makeDb/trackDb/human/genePredArchive.html
@@ -1,41 +1,41 @@
Description
This supertrack is a collection of gene prediction tracks and is composed of the following tracks:
- AUGUSTUS
-
shows ab initio predictions from the program
AUGUSTUS
(version 3.1). The predictions are based on the genome sequence alone.
- Geneid Genes
-
shows gene predictions from the
geneid
program. Geneid is a program to predict genes in anonymous genomic sequences designed with a
hierarchical structure.
- Genscan Genes
-
shows predictions from the
Genscan
program. The predictions are based on transcriptional, translational and donor/acceptor
splicing signals as well as the length and compositional distributions of exons, introns and
intergenic regions.
- SGP Genes
-
shows gene predictions from the
SGP2 homology-based gene
prediction program. To predict genes in a genomic query, SGP2 combines geneid predictions with
tblastx comparisons of the genome of the target species against genomic sequences of other
species (reference genomes) deemed to be at an appropriate evolutionary distance from the
target.
- SIB Genes
-
a transcript-based set of gene predictions based on data from RefSeq and
EMBL/GenBank. The track includes both protein-coding and non-coding transcripts. The coding
regions are predicted using
- ESTScan.
+ ESTScan.
More information about display conventions, methods, credits, and references can be found on each
subtrack's description page.