2e584a1c66bae4339bd009372f47e97f0636fe85 hiram Tue Oct 29 15:01:41 2024 -0700 indicate which paraHub the cluster job is on refs #34685 diff --git src/hg/utils/automation/doRepeatMasker.pl src/hg/utils/automation/doRepeatMasker.pl index c09eafb..a45cb52 100755 --- src/hg/utils/automation/doRepeatMasker.pl +++ src/hg/utils/automation/doRepeatMasker.pl @@ -424,30 +424,31 @@ $gensub2 $partDir/partitions.lst single gsub jobList $binPara $parasolRAM make jobList $binPara check $binPara time > run.time cat run.time _EOF_ ); if (! $opt_unmaskedSeq && ! $inHive) { $bossScript->add(<<_EOF_ rm -f $clusterSeq _EOF_ ); } + `touch "$runDir/para_hub_$paraHub"`; $bossScript->execute(); } # doCluster ######################################################################### # * step: cat [fileServer] sub doCat { my $runDir = "$buildDir"; if (! -s "${ncbiRmsk}" ) { &HgAutomate::checkExistsUnlessDebug('cluster', 'cat', "$buildDir/run.cluster/run.time"); } if ( -s "$runDir/doCat.bash" ) { if ( ! (-s "$runDir/$db.sorted.fa.out.gz" || -s "$runDir/$db.sorted.fa.out" ) ) { die "\nERROR: cat step may not be completed properly\n"; } else {