2e3c89f43f3bb9d386178270200d0acce9fc8050 lrnassar Fri Nov 22 17:47:13 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/human/hgdpFst.html src/hg/makeDb/trackDb/human/hgdpFst.html index 4a16ed10..bb54d08 100644 --- src/hg/makeDb/trackDb/human/hgdpFst.html +++ src/hg/makeDb/trackDb/human/hgdpFst.html @@ -16,31 +16,31 @@ <A HREF="http://hgdp.uchicago.edu/" TARGET=_BLANK>HGDP Selection Browser</A>. </P> <P> From <A HREF="https://en.wikipedia.org/wiki/Fixation_index" TARGET=_BLANK>Wikipedia</A>: <blockquote> Fixation index (F<sub>ST</sub>) is a measure of population differentiation based on genetic polymorphism data, such as Single nucleotide polymorphisms (SNPs) or microsatellites. It is a special case of <A HREF="https://en.wikipedia.org/wiki/F-statistics" TARGET=_BLANK>F-statistics</A>, the concept developed in the 1920s by Sewall Wright. This statistic compares the genetic variability within and between populations and is frequently used in the field of population genetics. </blockquote> -From <A HREF="http://www.uwyo.edu/dbmcd/popecol/maylects/popgengloss.html" +From <A HREF="https://www.uwyo.edu/dbmcd/popecol/maylects/popgengloss.html" TARGET=_BLANK>http://www.uwyo.edu/dbmcd/popecol/Maylects/PopGenGloss.html</A>: <blockquote> F<sub>ST</sub> is the proportion of the total genetic variance contained in a subpopulation (the S subscript) relative to the total genetic variance (the T subscript). Values can range from 0 to 1. High F<sub>ST</sub> implies a considerable degree of differentiation among populations. </blockquote> </P> <H2>Methods</H2> <P> Samples collected by the HGDP-CEPH from 1,043 individuals from around the world were genotyped for 657,000 SNPs at <A HREF="https://hagsc.org/hgdp/" TARGET=_BLANK>Stanford</A>.