2e3c89f43f3bb9d386178270200d0acce9fc8050 lrnassar Fri Nov 22 17:47:13 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/mouse/recombRateMouse.html src/hg/makeDb/trackDb/mouse/recombRateMouse.html index 38c021f..13a3fbc 100644 --- src/hg/makeDb/trackDb/mouse/recombRateMouse.html +++ src/hg/makeDb/trackDb/mouse/recombRateMouse.html @@ -3,31 +3,31 @@ rates of recombination based on either the Whitehead Institute (WI) or MGD genetic maps. By default, the WI genetic map rates are displayed. Female and male specific recombination rates are not available for these maps. </P> <H2>Methods</H2> <P> The <A href="http://www-genome.wi.mit.edu/cgi-bin/mouse/index" TARGET=_blank>WI Mouse Genetic Map</A> is based on 6,336 genetic markers with a total of 92 meiotic events. For more information on this map, see W.F. Dietrich et. al., "A comprehensive genetic map of the mouse genome.", <em>Nature</em>, 380(6570), pages 149-152 (1996). </P> <P> The MGD Genetic Map was created at the <A -href="http://www.informatics.jax.org/" TARGET=_blank>Jackson +href="https://www.informatics.jax.org//" TARGET=_blank>Jackson Laboratory</A>. </P> <P> Data for these maps was downloaded from the <A href="ftp://ftp.ncbi.nih.gov/genomes/M_musculus/Mapping_data/" TARGET=_blank>NCBI ftp site</A>. <P> Each base is assigned the recombination rate calculated by assuming a linear genetic distance across the immediately flanking genetic markers. The recombination rate assigned to each 1 Mb window is the average recombination rate of the bases contained within the window. </P> <H2>Using the Filter</H2> <P>To view a particular map, select the corresponding option from the "Map Distances" pulldown list. By default, the browser