2e3c89f43f3bb9d386178270200d0acce9fc8050 lrnassar Fri Nov 22 17:47:13 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/mouse/stsMapMouseNew.html src/hg/makeDb/trackDb/mouse/stsMapMouseNew.html index 1149e74..809cf86 100644 --- src/hg/makeDb/trackDb/mouse/stsMapMouseNew.html +++ src/hg/makeDb/trackDb/mouse/stsMapMouseNew.html @@ -1,28 +1,28 @@ <H2>Description</H2> <P>This track shows locations of Sequence Tagged Sites (STS) along the mouse draft assembly. These markers have been mapped using either genetic mapping (<A href="https://www.broadinstitute.org/science/projects/mammals-models/mouse/old-mouse-genome-data" -TARGET=_blank>WICGR Mouse Genetic Map</A>, <A href="http://www.informatics.jax.org/" +TARGET=_blank>WICGR Mouse Genetic Map</A>, <A href="https://www.informatics.jax.org//" TARGET=_blank>MGD Genetic Map</A>) or radiation hybridization mapping (<A href="https://www.broadinstitute.org/mouse_rh/index.html" TARGET=_blank>Whitehead/MRC RH Map</A>) techniques.</p> Additional data on the individual maps can be found at the following links: <UL> <LI>NCBI UniSTS -<LI><A href="http://www.informatics.jax.org" TARGET=_blank> Mouse Genome Informatics (MGI)</A> +<LI><A href="https://www.informatics.jax.org/" TARGET=_blank> Mouse Genome Informatics (MGI)</A> </UL> <P>By default all genetic map markers are shown as blue; only radiation hybrid markers and markers that are neither genetic nor radiation hybrid are shown as black; markers that map to more than one position are shown in lighter colors. Users can choose a color to highlight a subset of markers of interest from the Filter options in STS Markers Track Setting page. <H2>Methods</H2> <P>Positions of STS markers are determined using both full sequences and primer information. Full sequences are aligned using <A HREF="https://genome.cshlp.org/content/12/4/656.full" TARGET=_blank>blat</A>, while <A HREF="https://www.ncbi.nlm.nih.gov/sutils/e-pcr/"