2e3c89f43f3bb9d386178270200d0acce9fc8050 lrnassar Fri Nov 22 17:47:13 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/celeraDupPositive.html src/hg/makeDb/trackDb/celeraDupPositive.html index 4709abf..a7aba8f 100644 --- src/hg/makeDb/trackDb/celeraDupPositive.html +++ src/hg/makeDb/trackDb/celeraDupPositive.html @@ -1,39 +1,39 @@ <H2>Description</H2> <P> High-depth sequence reads from the Celera project were used to detect paralogy in the human genome reference sequence. This track shows confirmed segmental duplications, defined as having similarity to sequences in the Segmental Duplication Database (SDD) of greater than 90% over more than 250 bp of repeatmasked sequence. For a description of the whole-genome shotgun sequence detection (WSSD) "fuguization" method, see Bailey, J.A. <em>et al</em>. (2001) in the References section below.</P> <H2>Credits</H2> <P> The data were provided by <A HREF="mailto:xws@gs.washington.edu">Xinwei She</A> and <A HREF="mailto:eee@gs.washington.edu">Evan Eichler</A> as part of their efforts to map <A HREF = "http://humanparalogy.gs.washington.edu" TARGET = _blank>human paralogy</A> at the -<A HREF="http://eichlerlab.gs.washington.edu/" +<A HREF="https://eichlerlab.gs.washington.edu/" TARGET=_BLANK>University of Washington</A>.</P> <H2>References</H2> <P> Bailey, J.A., <em>et al</em>., -<A HREF = "http://eichlerlab.gs.washington.edu/eichler/pub/pub35.html" +<A HREF = "https://eichlerlab.gs.washington.edu/eichler/pub/pub35.html" TARGET = _blank>Recent segmental duplications in the human genome</A>. <em>Science</em> <B>297</B>(5583), 945-7 (2002).</P> <P> Bailey, J.A., <em>et al</em>., <A HREF="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11381028&dopt=Abstract" TARGET=_blank>Segmental duplications: organization and impact within the current human genome project assembly</A>, <em>Genome Res.</em> <B>11</B>(6), 1005-17 (2001).</P> <P> She, X., <em>et al</em>., <A HREF = "https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15496912" TARGET = _blank>Shotgun sequence assembly and recent segmental duplications within the human genome</A>. <em>Nature</em> <B>431</B>(7011), 927-30 (2004). </P>