2e3c89f43f3bb9d386178270200d0acce9fc8050 lrnassar Fri Nov 22 17:47:13 2024 -0800 Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM. diff --git src/hg/makeDb/trackDb/mouse/jaxGeneTrap.html src/hg/makeDb/trackDb/mouse/jaxGeneTrap.html index 70aae69..221b41b 100644 --- src/hg/makeDb/trackDb/mouse/jaxGeneTrap.html +++ src/hg/makeDb/trackDb/mouse/jaxGeneTrap.html @@ -1,34 +1,34 @@ <H2>Description</H2> <P> This track shows gene trap sequence tags from GenBank <A HREF="https://www.ncbi.nlm.nih.gov/dbGSS/" TARGET=_BLANK>dbGSS</A> that have an RNA-based sequence tag method (5'-RACE or 3'-RACE) or DNA-based sequence tag method. DNA-based gene trap sequence tags (purple) are derived from genomic DNA at the site of gene trap vector insertion. RNA-based gene trap sequence tags are derived from the exon adjacent to the insertion site. If the sequence tag method is 5'-RACE (blue), the insertion site is in the intron downstream from the most 3' exon represented in the sequence tag. If the sequence tag is 3'-RACE (green), the insertion site is in the intron upstream from the most 5' exon represented in the sequence tag. </P> <P> Gene trap mutagenesis requires that the vector inserts in the correct transcriptional orientation of the "trapped" gene. Sequence tags that overlap known genes in the opposite transcriptional orientation do not disrupt those genes from a gene trapping mechanism. </P> <H2>Methods</H2> <P> Sequence tags were collected from dbGSS and aligned to the reference genome by -<A HREF="http://www.informatics.jax.org/" TARGET=_BLANK>Mouse Genome +<A HREF="https://www.informatics.jax.org//" TARGET=_BLANK>Mouse Genome Informatics (MGI)</A> at The Jackson Laboratory.</P> <H2>Credits</H2> <P> Thanks to -<A HREF="http://www.informatics.jax.org/" TARGET=_BLANK>MGI</A> +<A HREF="https://www.informatics.jax.org//" TARGET=_BLANK>MGI</A> at The Jackson Laboratory, and Bob Sinclair in particular, for providing these data.</P>