fda94da6315d3cbcd541a8580870dad45697b2bc galt Fri Jan 10 00:57:53 2025 -0800 Revert "fixing compiler warnings for htslib compiling Rocky 9 hgwdev-new." This reverts commit cde73cd256f16555d283a8e7539e946e63151ede. diff --git src/htslib/hts.c src/htslib/hts.c index 0b183d7..1f14725 100644 --- src/htslib/hts.c +++ src/htslib/hts.c @@ -1109,31 +1109,31 @@ typedef struct { int32_t n, m; uint64_t *offset; } lidx_t; struct __hts_idx_t { int fmt, min_shift, n_lvls, n_bins; uint32_t l_meta; int32_t n, m; uint64_t n_no_coor; bidx_t **bidx; lidx_t *lidx; uint8_t *meta; struct { uint32_t last_bin, save_bin; - uint last_coor, last_tid, save_tid, finished; + int last_coor, last_tid, save_tid, finished; uint64_t last_off, save_off; uint64_t off_beg, off_end; uint64_t n_mapped, n_unmapped; } z; // keep internal states }; static inline void insert_to_b(bidx_t *b, int bin, uint64_t beg, uint64_t end) { khint_t k; bins_t *l; int absent; k = kh_put(bin, b, bin, &absent); l = &kh_value(b, k); if (absent) { l->m = 1; l->n = 0;