614bfb99ad0bd183574f839e1fb2d589b004c81c galt Fri Jan 10 01:20:12 2025 -0800 Brian in code review asked me to reverse these changes on hgwdev, however they were working just fine. May restore them soon. diff --git src/inc/common.mk src/inc/common.mk index ed07a2d..e23b4ac 100644 --- src/inc/common.mk +++ src/inc/common.mk @@ -159,38 +159,40 @@ HALDIR = /hive/groups/browser/hal/build/hal.2024-12-12 #HALDIR = /hive/groups/browser/hal/build/rocky9/hal.2024-12-18 ifneq ($(wildcard ${HALDIR}),) ifeq (${USE_HAL},) USE_HAL=1 endif endif endif endif ifeq (${USE_HAL},1) # force static libraries to keep programs portable HDF5DIR=/hive/groups/browser/hal/build/hdf5-1.12.0 HDF5LIBDIR=${HDF5DIR}/local/lib HDF5LIBS=${HDF5LIBDIR}/libhdf5_cpp.a ${HDF5LIBDIR}/libhdf5.a ${HDF5LIBDIR}/libhdf5_hl.a - HALLIBS=${HALDIR}/hal/lib/libHalBlockViz.a ${HALDIR}/hal/lib/libHalMaf.a ${HALDIR}/hal/lib/libHalLiftover.a ${HALDIR}/hal/lib/libHalLod.a ${HALDIR}/hal/lib/libHal.a ${HALDIR}/sonLib/lib/sonLib.a ${HDF5LIBS} -lz + ifeq (${HOSTNAME},hgwdev-new) + HALLIBS=${HALDIR}/hal/lib/libHalBlockViz.a ${HALDIR}/hal/lib/libHalMaf.a ${HALDIR}/hal/lib/libHalLiftover.a ${HALDIR}/hal/lib/libHalLod.a ${HALDIR}/hal/lib/libHal.a ${HALDIR}/sonLib/lib/sonLib.a ${HDF5LIBS} -lz HALLIBS += /cluster/software/lib/libcurl.a /usr/lib/gcc/x86_64-redhat-linux/11/libstdc++.a + #HALLIBS += /cluster/software/lib/libcurl.a /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libstdc++.a + #HALLIBS=${HALDIR}/hal/lib/libHalBlockViz.a ${HALDIR}/hal/lib/libHalMaf.a ${HALDIR}/hal/lib/libHalLiftover.a ${HALDIR}/hal/lib/libHalLod.a ${HALDIR}/hal/lib/libHal.a ${HALDIR}/sonLib/lib/sonLib .a ${HDF5LIBS} + #HALLIBS += -lcurl -lstdc++ else ifeq (${HOSTNAME},hgwdev) - HALLIBS += /cluster/software/lib/libcurl.a /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libstdc++.a - else - HALLIBS += -lcurl -lstdc++ + HALLIBS=${HALDIR}/hal/lib/libHalBlockViz.a ${HALDIR}/hal/lib/libHalMaf.a ${HALDIR}/hal/lib/libHalLiftover.a ${HALDIR}/hal/lib/libHalLod.a ${HALDIR}/hal/lib/libHal.a ${HALDIR}/sonLib/lib/sonLib .a ${HDF5LIBS} -lcurl -lstdc++ endif endif HG_DEFS+=-DUSE_HAL HG_INC+=-I${HALDIR}/inc -I${HALDIR}/hal/blockViz/inc endif # on hgwdev, include HAL by defaults ifeq (${IS_HGWDEV},yes) L+=${HALLIBS} endif ifeq (${USE_HIC},) USE_HIC=1 endif ifeq (${USE_HIC},1)