b0c17e134726b4a4111fef680ae14c563220f998 gperez2 Tue Jan 7 20:56:04 2025 -0800 Code review edits for the NCBI Gene Orthologs track description, refs #35020 diff --git src/hg/makeDb/trackDb/human/refSeqComposite.html src/hg/makeDb/trackDb/human/refSeqComposite.html index 5d940ee..7ab9527 100644 --- src/hg/makeDb/trackDb/human/refSeqComposite.html +++ src/hg/makeDb/trackDb/human/refSeqComposite.html @@ -76,32 +76,39 @@
  • RefSeq Historical – previous RefSeq transcript versions, including NM_ accessions and HGVS searches. This track is only available on hg38.
  • NCBI Orthologs – Orthologous genes were identified by NCBI's Eukaryotic Genome Annotation Pipeline for the NCBI Gene dataset using a combination of protein sequence similarity and local synteny analysis. Orthology is determined between the genome being annotated and a reference genome, such as human or zebrafish, and pairs of orthologs are grouped together. Transitive relationships are inferred within each group, for example, zebrafish <-> human <-> mouse. For more information on how NCBI calculates orthologs, see the details provided - here. This track is available for the following assemblies: hg38, mm39, danRer11, canFam6, - and bosTau9. + here. This track is available for the following assemblies: + hg38, + mm39, + danRer11, + canFam6, and + bosTau9.

    • The RefSeq All, RefSeq Curated, RefSeq Predicted, RefSeq HGMD, RefSeq Select/MANE and UCSC RefSeq tracks follow the display conventions for gene prediction tracks. The color shading indicates the level of review the RefSeq record has undergone: predicted (light), provisional (medium), or reviewed (dark), as defined by RefSeq.