45e522e373c59faefa8a961c2bb3d44c93e84877 jcasper Wed Jan 22 14:12:50 2025 -0800 Revising server name tests after migration, more to come. refs #35048 diff --git src/inc/common.mk src/inc/common.mk index 36a3753edc4..c77d41d8676 100644 --- src/inc/common.mk +++ src/inc/common.mk @@ -16,35 +16,35 @@ endif ifneq (,$(findstring -,$(MACHTYPE))) # $(info MACHTYPE has - sign ${MACHTYPE}) MACHTYPE:=$(shell uname -m) # $(info MACHTYPE has - sign set to: ${MACHTYPE}) endif HG_DEFS=-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_${MACHTYPE} HG_INC+=-I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I$(kentSrc)/htslib # to check for Mac OSX Darwin specifics: UNAME_S := $(shell uname -s) # to check for builds on hgwdev HOSTNAME = $(shell uname -n) -ifeq (${HOSTNAME},hgwdev-new) +ifeq (${HOSTNAME},hgwdev) IS_HGWDEV = yes OURSTUFF = /cluster/software/r9 else - ifeq (${HOSTNAME},hgwdev) + ifeq (${HOSTNAME},hgwdev-old.gi.ucsc.edu) IS_HGWDEV = yes OURSTUFF = /cluster/software else IS_HGWDEV = no endif endif ifeq (${ZLIB},) ifneq ($(wildcard /lib64/libz.a),) ZLIB=/lib64/libz.a else ZLIB=-lz endif endif @@ -170,34 +170,34 @@ #HALDIR = /hive/groups/browser/hal/build/rocky9/hal.2024-12-18 ifneq ($(wildcard ${HALDIR}),) ifeq (${USE_HAL},) USE_HAL=1 endif endif endif endif ifeq (${USE_HAL},1) # force static libraries to keep programs portable HDF5DIR=/hive/groups/browser/hal/build/hdf5-1.12.0 HDF5LIBDIR=${HDF5DIR}/local/lib HDF5LIBS=${HDF5LIBDIR}/libhdf5_cpp.a ${HDF5LIBDIR}/libhdf5.a ${HDF5LIBDIR}/libhdf5_hl.a HALLIBS=${HALDIR}/hal/lib/libHalBlockViz.a ${HALDIR}/hal/lib/libHalMaf.a ${HALDIR}/hal/lib/libHalLiftover.a ${HALDIR}/hal/lib/libHalLod.a ${HALDIR}/hal/lib/libHal.a ${HALDIR}/sonLib/lib/sonLib.a ${HDF5LIBS} ${ZLIB} - ifeq (${HOSTNAME},hgwdev-new) + ifeq (${HOSTNAME},hgwdev) HALLIBS += ${OURSTUFF}/lib/libcurl.a /usr/lib/gcc/x86_64-redhat-linux/11/libstdc++.a else - ifeq (${HOSTNAME},hgwdev) + ifeq (${HOSTNAME},hgwdev-old.gi.ucsc.edu) HALLIBS += ${OURSTUFF}/lib/libcurl.a /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libstdc++.a else HALLIBS += -lcurl -lstdc++ endif endif HG_DEFS+=-DUSE_HAL HG_INC+=-I${HALDIR}/inc -I${HALDIR}/hal/blockViz/inc endif # on hgwdev, include HAL by defaults ifeq (${IS_HGWDEV},yes) L+=${HALLIBS} endif ifeq (${USE_HIC},) USE_HIC=1 @@ -284,42 +284,42 @@ ifneq ($(wildcard /lib64/libbz2.a),) BZ2LIB=/lib64/libbz2.a else BZ2LIB=-lbz2 endif endif # on hgwdev, use the static libraries ifeq (${IS_HGWDEV},yes) HG_INC += -I${OURSTUFF}/include HG_INC += -I${OURSTUFF}/include/mariadb FULLWARN = yes L+=/hive/groups/browser/freetype/freetype-2.10.0/objs/.libs/libfreetype.a L+=${OURSTUFF}/lib64/libssl.a ${OURSTUFF}/lib64/libcrypto.a -ldl - ifeq (${HOSTNAME},hgwdev-new) + ifeq (${HOSTNAME},hgwdev) PNGLIB=${OURSTUFF}/lib/libpng.a PNGINCL=-I${OURSTUFF}/include/libpng16 else PNGLIB=/usr/lib64/libpng.a PNGINCL=-I/usr/include/libpng15 endif MYSQLINC=/usr/include/mysql MYSQLLIBS=${OURSTUFF}/lib64/libmariadbclient.a ${OURSTUFF}/lib64/libssl.a ${OURSTUFF}/lib64/libcrypto.a -ldl ${ZLIB} - ifeq (${HOSTNAME},hgwdev-new) + ifeq (${HOSTNAME},hgwdev) MYSQLLIBS += /usr/lib/gcc/x86_64-redhat-linux/11/libstdc++.a /usr/lib64/librt.a else MYSQLLIBS += /usr/lib/gcc/x86_64-redhat-linux/4.8.5/libstdc++.a /usr/lib64/librt.a endif else ifeq (${CONDA_BUILD},1) L+=${PREFIX}/lib/libssl.a ${PREFIX}/lib/libcrypto.a -ldl else ifneq (${SSLLIB},) L+=${SSLLIB} else L+=-lssl endif ifneq (${CRYPTOLIB},)