079452db1366f3fdeac159871bf2950ffc8fb48b
lrnassar
  Tue Jan 21 16:46:20 2025 -0800
Adding setColorWith settings to all the docs. Refs #34958

diff --git src/hg/htdocs/goldenPath/help/bigWig.html src/hg/htdocs/goldenPath/help/bigWig.html
index b4f3886cbbd..b6960c69d24 100755
--- src/hg/htdocs/goldenPath/help/bigWig.html
+++ src/hg/htdocs/goldenPath/help/bigWig.html
@@ -93,31 +93,33 @@
   <strong>autoScale         </strong><em>&lt;on|off&gt;                            </em> # default is on
   <strong>alwaysZero        </strong><em>&lt;on|off&gt;                            </em> # default is off
   <strong>gridDefault       </strong><em>&lt;on|off&gt;                            </em> # default is off
   <strong>maxHeightPixels   </strong><em>&lt;max:default:min&gt;                   </em> # default is 128:128:11
   <strong>graphType         </strong><em>&lt;bar|points&gt;                        </em> # default is bar
   <strong>viewLimits        </strong><em>&lt;lower:upper&gt;                       </em> # default is range found in data
   <strong>viewLimitsMax     </strong><em>&lt;lower:upper&gt;                       </em> # suggested bounds of viewLimits, but not enforced
   <strong>yLineMark         </strong><em>&lt;real-value&gt;                        </em> # default is 0.0
   <strong>yLineOnOff        </strong><em>&lt;on|off&gt;                            </em> # default is off
   <strong>windowingFunction </strong><em>&lt;mean+whiskers|maximum|mean|minimum&gt;</em> # default is maximum, mean+whiskers is recommended
   <strong>smoothingWindow   </strong><em>&lt;off|[2-16]&gt;                        </em> # default is off
   <strong>transformFunc     </strong><em>&lt;NONE|LOG&gt;                          </em> # default is NONE</pre>
 <p>
 For further information on custom bigWig track settings, see the 
 <a href="trackDb/trackDbDoc.html#wig_-_Signal_Graphing_Track_Settings">Track Database Definition 
-Document</a>. For more information on how bigWig settings are used in native Genome Browser tracks, 
+Document</a>. This includes information on how to <a href="/goldenPath/help/trackDb/trackDbHub.html#setColorWith"
+target="_blank">add different colors to regions of the bigWig</a>. For more information on how 
+bigWig settings are used in native Genome Browser tracks, 
 see the <a href="hgWiggleTrackHelp.html">Configuring graph-based tracks</a> page.</p>
 
 <h2>Examples</h2>
 
 <h3>Example #1</h3>
 <p>
 In this example, you create a bigWig custom track using an existing bigWig file on the UCSC
 http server. The file contains data that spans chromosome 21 on the hg19 assembly. 
 <p>
 To create a custom track using this bigWig file:
 <ol>
   <li>
   Paste the URL <code>http://genome.ucsc.edu/goldenPath/help/examples/bigWigExample.bw</code> onto 
   the <a href="../../cgi-bin/hgCustom">custom track management page</a> for the human assembly 
   hg19 (Feb.  2009).</li>