6990d48baaf213bbcdcfc1c69f933abe1654fe12
brianlee
  Thu Feb 13 13:18:29 2025 -0800
Adding to cdwSubmit.c otherSupportedFormats raw and xls to bypass error Format X is not supported

diff --git src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
index 588cfd16b30..a5785aa78fa 100644
--- src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
+++ src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
@@ -560,30 +560,31 @@
         errAbort("Character '%c' (binary %d) not allowed in fileName '%s'", c, (int)c, fileName);
 }
 
 boolean isSupportedFormat(char *format)
 /* Return TRUE if this is one of our supported formats */
 {
 /* First deal with non bigBed */
 static char *otherSupportedFormats[] = {"unknown", "fastq", "bam", "bed", "gtf", 
     "bam.bai", "vcf.gz.tbi",
     "bigWig", "bigBed", 
     "bedLogR", "bedRrbs", "bedMethyl", "broadPeak", "narrowPeak", 
     "bed_bedLogR", "bed_bedRrbs", "bed_bedMethyl", "bed_broadPeak", "bed_narrowPeak",
     "bedRnaElements", "openChromCombinedPeaks", "peptideMapping", "shortFrags", 
     "rcc", "idat", "fasta", "customTrack", "pdf", "png", "vcf", "cram", "jpg", "text", "html",
     "tsv", "csv",
+    "raw", "xls",
     "kallisto_abundance", "expression_matrix",
     };
 static int otherSupportedFormatsCount = ArraySize(otherSupportedFormats);
 if (stringArrayIx(format, otherSupportedFormats, otherSupportedFormatsCount) >= 0)
     return TRUE;
 
 /* If starts with bed_ then skip over prefix.  It will be caught by bigBed */
 if (startsWith("bed_", format))
     format += 4;
 return cdwIsSupportedBigBedFormat(format);
 }
 
 void prefetchChecks(char *format, char *fileName, char *submitDir)
 /* Perform some basic format checks. */
 {