Commits for angie

v479_preview2 to v479_base (2025-03-10 to 2025-03-17) v479

7039e0813fcb8d36a43b3b115b47781ea20488b4 Tue Mar 11 10:02:10 2025 -0700

• Fix frameshift filter setting for dbSnp153 (SO term encoded as 865 not 0865) and dbSnp155 (different SO term: 1589 frameshift_variant instead of 865 frameshift). refs #35344
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 22, context: html, text, full: html, text

8023a86c18c4eecf838f9e40abfe963627cee967 Wed Mar 12 13:22:03 2025 -0700

• Make warning about extra file(s) from usher appear only on hgwdev*/genome-test, and account for a file that for some reason gets a slightly different name on the RR. refs #35363
  • src/hg/hgPhyloPlace/runUsher.c - lines changed 15, context: html, text, full: html, text