bb787f680e151b54e5f3580272d295d7c1b549b3 gperez2 Thu Mar 6 15:02:12 2025 -0800 Updating the MITOMAP newsarch.html, refs #24849 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 68ad1169a21..78306856513 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -60,47 +60,48 @@ href="https://github.com/ucscGenomeBrowser/kent/commits/master" target=_blank>GitHub page</a>. Lastly, see our <a href="credits.html" target="_blank"> credits page</a> for acknowledgments of the data we host.</p> <!-- ============= 2025 archived news ============= --> <a name="2025"></a> <a name="030625"></a> <h2>Mar. 06, 2025 New MITOMAP track for hg38 and hg19</h2> <p> We are pleased to announce the release of the MITOMAP track for the <a target="_blank" href="/cgi-bin/hgTrackUi?db=hg38&c=chrM&g=mitoMap">hg38/GRCh38</a> and <a target="_blank" href="/cgi-bin/hgTrackUi?db=hg19&c=chrMT&g=mitoMap">hg19/GRCh37</a> human assemblies. <a target="_blank" href="https://www.mitomap.org/foswiki/bin/view/MITOMAP/WebHome">MITOMAP</a> -is a database of human mitochondrial DNA (mtDNA) variation, allowing users to look up human -mitochondrial gene loci, search public mitochondrial sequences, and browse or search for reported -nucleotide variants in both the general population and clinical disease studies. +is a database of human mitochondrial DNA (mtDNA) information containing a compilation of mtDNA +variation, allowing users to look up human mitochondrial gene loci, search public mitochondrial +sequences, and browse or search for reported nucleotide variants in both the general population and +clinical disease studies. </p> <p> This release includes two tracks within the MITOMAP composite track: </p> <ul> <li><b>MITOMAP Control and Coding Variants</b> – Contains variants, including mini insertions and deletions, in the complete mtDNA. The item colors correspond to the variant type: <b><font color="#53AF01">control region</font></b> - vs. <b><font color="#3E89D3">coding region</font></b> + vs. <b><font color="#3E89D3">coding region</font></b>. <li><b>MITOMAP Disease Mutations</b> – Contains disease-annotated mutations (variants) in the complete mtDNA. The item colors correspond to the variant type: <b><font color="##015587">coding/control</font></b> - vs.<b><font color="#9933FF">rRNA/tRNA</font></b> + vs. <b><font color="#9933FF">rRNA/tRNA</font></b>. </ul> <div class="text-center"> <a href="https://genome.ucsc.edu/s/gperez2/MITOMAP" target="_blank"> <img src="../images/newsArchImages/mitoMap_MT_TL1.jpg" alt="hg38 session visualizing the MITOMAP track" width='60%'></a> </div> <p> More information on this composite track can be found on the <a href="/cgi-bin/hgTrackUi?db=hg38&c=chrM&g=mitoMap#TRACK_HTML" target="_blank">track description</a> page. </p> <p> We would like to thank Shiping Zhang and the entire MITOMAP resource for making these annotations available. We would also like to thank Max Haeussler, Luis Nassar, and Gerardo Perez for their