7f7a9a5579d7acec698c51dbf93f5030ce1a0439 braney Tue Apr 8 15:43:17 2025 -0700 support genePred in quickLift diff --git src/hg/inc/genePred.h src/hg/inc/genePred.h index 50706827b91..cf0e3cbe84a 100644 --- src/hg/inc/genePred.h +++ src/hg/inc/genePred.h @@ -402,16 +402,19 @@ char **protRet, char **cdsRet); /* Translate a genePred into a protein. It can also return the CDS part of the * mRNA sequence. If the chrom is chrM, the mitochondrial translation tables are * used. If protRet or cdsRet is NULL, those sequences are not returned. */ void genePredToCds(struct genePred *gp, struct genbankCds *cds); /* Fill in cds with transcript offsets computed from genePred. */ struct psl *genePredToPsl(struct genePred *gp, int chromSize, int qSize); /* Convert a genePred to psl, assuming perfect concordance between target & query. * If qSize is 0 then the number of aligned bases will be used as qSize. */ struct genePredExt *genePredFromBedBigGenePred( char *chrom, struct bed *bed, struct bigBedInterval *bb); /* build a genePred from a bigGenePred and a bed file */ + +struct genePred *genePredExtLoad15(char **row); +/* Load a genePred record assumed to be 15 fields. */ #endif /* GENEPRED_H */