d90ebafc3574dccc5db20b875c6ebf5cd193e616
gperez2
  Thu May 1 16:36:47 2025 -0700
Adding the VISTA Enhancers 2025 update, refs #35531

diff --git src/hg/makeDb/doc/hg38/vistaEnhancers.txt src/hg/makeDb/doc/hg38/vistaEnhancers.txt
index 86d213c1e81..628873de445 100644
--- src/hg/makeDb/doc/hg38/vistaEnhancers.txt
+++ src/hg/makeDb/doc/hg38/vistaEnhancers.txt
@@ -1,14 +1,28 @@
 # VISTA Enhancers track refs #16044  (2023-09-20 Gerardo)
 cd /hive/data/outside/
 mkdir vistaEnhancers; cd vistaEnhancers
 mkdir hg38; cd hg38
 liftOver -bedPlus=9 /hive/data/outside/vistaEnhancers/hg19/sortedVistaEnhancers.bed /hive/data/gbdb/hg19/liftOver/hg19ToHg38.over.chain.gz vistaEnhancers.bed unMapped
 bedToBigBed -tab -type=bed9+ -as=/hive/data/outside/vistaEnhancers/hg19/vistaEnhancers.as vistaEnhancers.bed https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.chrom.sizes vistaEnhancers.bb
 cd /gbdb/hg38
 mkdir vistaEnhancers; cd vistaEnhancers
 # Making symlink for big files
 ln -s /hive/data/outside/vistaEnhancers/hg38/vistaEnhancers.bb
 cd ~/kent/src/hg/makeDb/trackDb/human/hg38
 vi trackDb.ra
 #############################################################################
+# VISTA Enhancers update 2025 #35531 (2025-04-30 Gerardo)
 
+cd /hive/data/outside/otto/vista
+wget -q  https://gitlab.com/egsb-mfgl/vista-data/-/raw/main/locus_ucsc_hg38.bed  -O vista.hg38.latest.bed
+
+bedToBigBed -tab -sort -type=bed9+1 -as=vista.as vista.hg38.latest.bed \
+  https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.chrom.sizes vista.hg38.latest.bb \
+  > /dev/null 2>&1
+
+mv vista.hg38.latest.bb vista.hg38.bb
+cd /gbdb/hg38/vistaEnhancers/
+# Making symlink for bigBed files
+ln -s /hive/data/outside/otto/vista/vista.hg38.bb vistaEnhancers.bb
+cd ~/kent/src/hg/makeDb/trackDb/human/hg38
+vi trackDb.ra