4c5c7294e5aa262c7a4691c989bc224f99866e97 jbirgmei Mon Apr 7 06:35:50 2025 -0700 New varaico track diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra index 08caa4a1cd5..255263386cd 100644 --- src/hg/makeDb/trackDb/human/trackDb.ra +++ src/hg/makeDb/trackDb/human/trackDb.ra @@ -215,40 +215,41 @@ shortLabel PubTator variants longLabel dbSNP variants and other genetic variants grounded to dbSNP by tmVar; collected by PubTator3 visibility dense type bigBed 9 + bigDataUrl /gbdb/$D/pubs2/pubtatorDbSnp.bb noScoreFilter on exonNumbers off itemRgb on parent varsInPubs pack urls pubmedIds="https://www.ncbi.nlm.nih.gov/pubmed/$$" mouseOver $name found in ${numPubmedIds} PubMed articles track varaico release alpha shortLabel Varaico Variants - longLabel Varaico Variants extracted from full text publications + longLabel Varaico Variants extracted from full text publications, titles, and abstracts visibility dense type bigBed 9 + bigDataUrl /gbdb/$D/bbi/varaico.bb noScoreFilter on exonNumbers off # itemRgb on dataVersion release 1 parent varsInPubs pack - urls outlink="$$" + urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" pmidCount="$outlink" + mouseOver $variantOrigStrs in: $author ($journal, $year) - $title track caseControl compositeTrack on shortLabel Case Control longLabel Case Control Consortium group phenDis visibility hide type chromGraph minMax 0,15 linesAt 5,10 track cccTrendPvalBd parent caseControl shortLabel CCC Bipolar Dis longLabel Case Control Consortium Bipolar Disorder Trend -log10 P-value