2373cd564a862f870831fc66bb4687e422848ffa
markd
  Sat Jun 7 14:11:06 2025 -0700
Import of CLS Long Read Data from GENCODE / CRG (aka what I did in Barcelona)

diff --git src/hg/makeDb/outside/clsLongReadRna/gff-attrs-extract.awk src/hg/makeDb/outside/clsLongReadRna/gff-attrs-extract.awk
new file mode 100644
index 00000000000..bd343c0cec8
--- /dev/null
+++ src/hg/makeDb/outside/clsLongReadRna/gff-attrs-extract.awk
@@ -0,0 +1,27 @@
+
+
+BEGIN{
+    print "transcriptId", "samplesMetadata", "artifact"
+    ID = ""
+}
+
+(transcriptId != "") && ($1 != transcriptId) {
+    print transcriptId, samplesMetadata, artifact
+}
+
+$2=="ID" {
+    transcriptId = $3
+}
+
+$2=="samplesMetadata" {
+    samplesMetadata = $3
+}
+
+$2=="artifact" {
+    artifact = $3
+}
+
+END {
+    print transcriptId, samplesMetadata, artifact
+}
+