Commits for mspeir

v483_preview to v483_preview2 (2025-05-26 to 2025-06-02) v483

17710ebe183000560daf8e3cfb56a86eaa382f58 Mon May 19 09:48:53 2025 -0700

• making tweaks to ENCODE long read transcripts track desc + config, refs #31368
  • src/hg/makeDb/trackDb/human/hg38/encode4.html - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/encode4.ra - lines changed 6, context: html, text, full: html, text

dff11e35ecb7bf69a571c414f5659c0aafccd555 Fri May 30 14:40:20 2025 -0700

• renaming encode4 ra+html -> encode4LongRnaTranscripts ra+html, refs #31368
  • src/hg/makeDb/trackDb/human/hg38/encode4LongRnaTranscripts.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/makeDb/trackDb/human/hg38/encode4LongRnaTranscripts.ra - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)

d1d6367f12d687564a36f426171e376f811ca28c Fri May 30 14:55:05 2025 -0700

• renaming ra+html files for mm10 encode4LongRnaTranscripts track, changing include in long_read_transcripts for hg38, refs #31368
  • src/hg/makeDb/trackDb/human/hg38/long_read_transcripts.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/encode4LongRnaTranscripts.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/makeDb/trackDb/mouse/mm10/encode4LongRnaTranscripts.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/long_read_transcripts.ra - lines changed 1, context: html, text, full: html, text

56a768368a17f700743be90f02caa9843d5eeaf2 Fri May 30 15:10:51 2025 -0700

• changing html parameter, refs #31368
  • src/hg/makeDb/trackDb/human/hg38/encode4LongRnaTranscripts.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/encode4LongRnaTranscripts.ra - lines changed 1, context: html, text, full: html, text

2961060a5326cd722ad604e48a1df6b386eb35a0 Fri May 30 16:04:44 2025 -0700

• various changes for encode4LongRnaTranscripts tracks on mm10 + hg38, refs #31368
  • src/hg/makeDb/trackDb/human/hg38/encode4LongRnaTranscripts.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/long_read_transcripts.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/long_read_transcripts.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/encode4LongRnaTranscripts.html - lines changed 32, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/encode4LongRnaTranscripts.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/long_read_transcripts.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/long_read_transcripts.ra - lines changed 2, context: html, text, full: html, text