71a74c027754ea2606ca4d6bcadc73c107dc3062 gperez2 Tue Jun 24 10:34:47 2025 -0700 Announcing the release of All GENCODE for hg38, hg19 (V48), and mm39 (VM37). refs #35185 #35184 #35188 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 231689a30e9..1011b8e0112 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -52,30 +52,67 @@
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+ ++We are happy to announce new GENCODE Gene annotation tracks, which correspond +to Ensembl 114, for three assemblies: hg19/GRCh37, +hg38/GRCh38, +and mm39/GRCm39. +For human, the GENCODE V47 annotations were mapped to hg38/GRCh38 and then back-mapped +to the hg19/GRCh37 assembly. For all three assemblies, the gene sets contain the following +tracks:
++The hg38 and mm39 assemblies also include the following track that is not available on hg19: +
++Details on each release can be found on the GENCODE site. This includes statistics on each release. +
We would like to thank the GENCODE project for providing these +annotations. We would also like to thank Mark Diekhans and Gerardo Perez for the development and +release of these tracks.
+ +We are happy to announce the release of the EVA SNP Release 7 tracks for 40 assemblies, which now includes bosTau9, ce11, and rn6. These tracks contain mappings of single nucleotide variants and small insertions and deletions (indels) — collectively Simple Nucleotide Variants (SNVs) — from the European Variation Archive (EVA) Release 7. The full list of assemblies that contain the EVA SNP release 7 track is below: