394790c4392a67d2837427efb96b45038b2d5364 lrnassar Thu Jun 19 10:07:15 2025 -0700 Adding a line break and removing the underscore. No RM. diff --git src/hg/makeDb/trackDb/human/revel.html src/hg/makeDb/trackDb/human/revel.html index f919a61de89..d3d59f405c9 100644 --- src/hg/makeDb/trackDb/human/revel.html +++ src/hg/makeDb/trackDb/human/revel.html @@ -93,45 +93,45 @@

Track colors

This track is colored according to Table 2 in Pejaver et al. The colors represent the recommended ClinGen score cutoffs. - + - +

Range Classification

≥ 0.644 Pathogenic_supporting Pathogenic supporting

0.643 - 0.291 Neutral

≤ 0.290 Benign_supporting Benign supporting

Range	Classification
≥ 0.644	Pathogenic_supporting	Pathogenic supporting
0.643 - 0.291	Neutral
≤ 0.290	Benign_supporting	Benign supporting

-More details on these scoring ranges can be found in Bergquist et al. Genet Med 2025, Table 2: +More details on these scoring ranges can be found in Bergquist et al. Genet Med 2025, Table 2:
Table 2 from Bergquist Genet Med 2025

For hg38, note that the data were converted from the hg19 data using the UCSC liftOver program, by the REVEL authors. This can lead to missing values or duplicated values. When a hg38 position is annotated with two scores due to the lifting, the authors removed all the scores for this position. They did the same when the reference nucleotide has changed from hg19 to hg38. Also, on hg38, the track has the "lifted" icon to indicate this . You can double-check if a nucleotide position is possibly affected by the lifting procedure by activating the track "Hg19 Mapping" under "Mapping and Sequencing".

Data access