cbe3d85f5bb91ffbd522c69ec3477c47af157320 lrnassar Thu Jun 19 10:20:05 2025 -0700 Needed one more line break. diff --git src/hg/makeDb/trackDb/human/revel.html src/hg/makeDb/trackDb/human/revel.html index d3d59f405c9..6a9c51d528c 100644 --- src/hg/makeDb/trackDb/human/revel.html +++ src/hg/makeDb/trackDb/human/revel.html @@ -108,30 +108,31 @@ Pathogenic supporting 0.643 - 0.291 Neutral ≤ 0.290 Benign supporting

More details on these scoring ranges can be found in Bergquist et al. Genet Med 2025, Table 2:
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Table 2 from Bergquist Genet Med 2025

For hg38, note that the data were converted from the hg19 data using the UCSC liftOver program, by the REVEL authors. This can lead to missing values or duplicated values. When a hg38 position is annotated with two scores due to the lifting, the authors removed all the scores for this position. They did the same when the reference nucleotide has changed from hg19 to hg38. Also, on hg38, the track has the "lifted" icon to indicate this . You can double-check if a nucleotide position is possibly affected by the lifting procedure by activating the track "Hg19 Mapping" under "Mapping and Sequencing".

Data access